Evidence map›Paper›PMID 24074864›Full record

ArticleCell2013

Hira-dependent histone H3.3 deposition facilitates PRC2 recruitment at developmental loci in ES cells.

Laura A Banaszynski, Duancheng Wen, Scott Dewell, Sarah J Whitcomb, Mingyan Lin, Nichole Diaz, Simon J Elsässer, Ariane Chapgier, Aaron D Goldberg, Eli Canaani and 3 more

Open access · bronzeAbstract read
In one paragraph

Article in Cell, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 195 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
195citing papers in PubMed, 1 pooled it
14.2field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

195 citing papers in PubMed, 1 synthesis or guideline pooled it, 282 citations in OpenAlex.

  1. Pooled it
  2. Article
  3. Article
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  5. Article
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  8. Article
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  12. Article
  13. Review
  14. Interrogating the regulatory epigenome of cellular senescence.Cellular and molecular life sciences : CMLS · 2025
    Review
  15. Article
  16. Totipotency or plenipotency: rethinking stem cell bipotentiality.Current opinion in genetics & development · 2025
    Review
  17. Review
  18. Article
  19. Article
  20. Review

135 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 5 institutions in 2 countries.

Laura A Banaszynski *Laboratory of Chromatin Biology & Epigenetics, The Rockefeller University, New York, New York, 10065 USA.
Duancheng Wen *Howard Hughes Medical Institute, Ansary Stem Cell Institute, and Department of Genetic Medicine, Weill Cornell Medical College, New York, New York, 10065 USA.
Scott DewellGenomics Resource Center, The Rockefeller University, New York, New York, 10065 USA.
Sarah J WhitcombLaboratory of Chromatin Biology & Epigenetics, The Rockefeller University, New York, New York, 10065 USA.
Mingyan LinDepartment of Genetics, Albert Einstein College of Medicine, Bronx, New York, 10461 USA.
Nichole DiazLaboratory of Chromatin Biology & Epigenetics, The Rockefeller University, New York, New York, 10065 USA.
Simon J ElsässerLaboratory of Chromatin Biology & Epigenetics, The Rockefeller University, New York, New York, 10065 USA.
Ariane ChapgierMolecular Medicine Unit, Institute of Child Health, London WC1N 1EH, UK.
Aaron D GoldbergLaboratory of Chromatin Biology & Epigenetics, The Rockefeller University, New York, New York, 10065 USA.
Eli CanaaniThe Department of Molecular Cell Biology, Weizmann Institute of Science, Rehovot 76100, Isreal.
Shahin RafiiHoward Hughes Medical Institute, Ansary Stem Cell Institute, and Department of Genetic Medicine, Weill Cornell Medical College, New York, New York, 10065 USA.
Deyou ZhengDepartment of Genetics, Albert Einstein College of Medicine, Bronx, New York, 10461 USA.
C David AllisLaboratory of Chromatin Biology & Epigenetics, The Rockefeller University, New York, New York, 10065 USA.
Rockefeller University · USAlbert Einstein College of Medicine · USCornell University · USHoward Hughes Medical Institute · USWeizmann Institute of Science · IL

Funding

Weill Cornell/Rockefeller/Sloan-Kettering MST ProgramT32GM007739 · NIGMS · WEILL MEDICAL COLL OF CORNELL UNIV · PI HSU, KATHARINE C · 1985 to 2023
$51.1M
Molecular analysis of bipolar and schizophrenia candidate genesR01MH073164 · NIMH · ALBERT EINSTEIN COLLEGE OF MEDICINE · PI LACHMAN, HERBERT M · 2006 to 2012
$1.6M
Analysis of Glutamatergic Neurons Derived from Patient-Specific iPS CellsR33MH087840 · NIMH · ALBERT EINSTEIN COLLEGE OF MEDICINE · PI LACHMAN, HERBERT M · 2010 to 2011
$814k
Analysis of Glutamatergic Neurons Derived from Patient-Specific iPS CellsR21MH087840 · NIMH · ALBERT EINSTEIN COLLEGE OF MEDICINE · PI LACHMAN, HERBERT M · 2009 to 2009
$332k
British Heart Foundation FS/10/31/28395Howard Hughes Medical InstituteNIGMS NIH HHS T32 GM007739NIMH NIH HHS MH073164NIMH NIH HHS MH087840NIMH NIH HHS R01 MH073164NIMH NIH HHS R21 MH087840NIMH NIH HHS R33 MH087840
6 · The paper itself

Abstract

Polycomb repressive complex 2 (PRC2) regulates gene expression during lineage specification through trimethylation of lysine 27 on histone H3 (H3K27me3). In Drosophila, polycomb binding sites are dynamic chromatin regions enriched with the histone variant H3.3. Here, we show that, in mouse embryonic stem cells (ESCs), H3.3 is required for proper establishment of H3K27me3 at the promoters of developmentally regulated genes. Upon H3.3 depletion, these promoters show reduced nucleosome turnover measured by deposition of de novo synthesized histones and reduced PRC2 occupancy. Further, we show H3.3-dependent interaction of PRC2 with the histone chaperone, Hira, and that Hira localization to chromatin requires H3.3. Our data demonstrate the importance of H3.3 in maintaining a chromatin landscape in ESCs that is important for proper gene regulation during differentiation. Moreover, our findings support the emerging notion that H3.3 has multiple functions in distinct genomic locations that are not always correlated with an "active" chromatin state.

Indexed as

AnimalsCell Cycle ProteinsCell DifferentiationChromatinDrosophila melanogasterEmbryonic Stem CellsHistone ChaperonesMiceMice, Inbred C57BLPolycomb Repressive Complex 2Promoter Regions, GeneticRNA Polymerase IITranscription FactorsUp-RegulationCell Cycle ProteinsChromatinHira protein, mouseHistone ChaperonesPolycomb Repressive Complex 2RNA Polymerase IITranscription Factors

Identifiers

PMID24074864
PMCPMC3838450
OpenAlexW2099188975

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.