Evidence map›Paper›PMID 24074568›Full record

ArticleVirology2013

Mechanisms of HIV-1 subtype C resistance to GRFT, CV-N and SVN.

Kabamba B Alexandre, Penny L Moore, Molati Nonyane, Elin S Gray, Nthabeleng Ranchobe, Ereck Chakauya, James B McMahon, Barry R O'Keefe, Rachel Chikwamba, Lynn Morris

Open access · greenAbstract read
In one paragraph

Article in Virology, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 20 papers.

0numbers the graph read from it
0cells of the map it votes in
20citing papers in PubMed
1.3field-weighted citation impact, top 21% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

20 citing papers in PubMed, 29 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Review
  5. Review
  6. Sustained-release Griffithsin nanoparticle-fiber composites against HIV-1 and HSV-2 infections.Journal of controlled release : official journal of the Controlled Release Society · 2020
    Article
  7. Article
  8. Article
  9. Engineering of a Lectibody Targeting High-Mannose-Type Glycans of the HIV Envelope.Molecular therapy : the journal of the American Society of Gene Therapy · 2019
    Article
  10. Review
  11. Review
  12. Review
  13. Article
  14. Article
  15. Review
  16. Article
  17. HIV-1 gp120 as a therapeutic target: navigating a moving labyrinth.Expert opinion on therapeutic targets · 2015
    Review
  18. Marine lectins and their medicinal applications.Applied microbiology and biotechnology · 2015
    Review
  19. Lectins with anti-HIV activity: a review.Molecules (Basel, Switzerland) · 2015
    Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 5 institutions in 2 countries.

Kabamba B AlexandreCentre for HIV and STIs, National Institute for Communicable Diseases, Johannesburg, South Africa; University of the Witwatersrand, Johannesburg, South Africa.
Penny L Moore
Molati Nonyane
Elin S Gray
Nthabeleng Ranchobe
Ereck Chakauya
James B McMahon
Barry R O'Keefe
Rachel Chikwamba
Lynn Morris
National Institute for Communicable DiseasesCouncil for Scientific and Industrial Research · ZATarget (United States) · USUniversity of the Witwatersrand · ZANational Health Laboratory Service · ZA

Funding

Molecular Targets ProgramZICBC010469 · NCI · DIVISION OF BASIC SCIENCES - NCI · PI OKEEFE, BARRY · 2009 to 2018
$31.4M
TUBERCULOSIS SUPPLEMENTD43TW000231 · FIC · COLUMBIA UNIV NEW YORK MORNINGSIDE · PI ABDOOL KARIM, QUARRAISHA · 1993 to 2014
$13.1M
FIC NIH HHS D43 TW000231Intramural NIH HHSWellcome TrustWellcome Trust 089933/Z/09/Z
6 · The paper itself

Abstract

We examined the ability of HIV-1 subtype C to develop resistance to the inhibitory lectins, griffithsin (GRFT), cyanovirin-N (CV-N) and scytovirin (SVN), which bind multiple mannose-rich glycans on gp120. Four primary HIV-1 strains cultured under escalating concentrations of these lectins became increasingly resistant tolerating 2 to 12 times their 50% inhibitory concentrations. Sequence analysis of gp120 showed that most had deletions of 1 to 5 mannose-rich glycans. Glycosylation sites at positions 230, 234, 241, 289 located in the C2 region and 339, 392 and 448 in the C3-C4 region were affected. Furthermore, deletions and insertions of up to 5 amino acids in the V4 region were observed in 3 of the 4 isolates. These data suggest that loss of glycosylation sites on gp120 as well as rearrangement of glycans in V4 are mechanisms involved in HIV-1 subtype C escape from GRFT, CV-N and SVN.

Indexed as

Drug Resistance, ViralAntiviral AgentsBacterial ProteinsCarrier ProteinsCell LineDrug ToleranceGlycosylationHIV-1HIV Envelope Protein gp120HumansInhibitory Concentration 50LectinsMembrane ProteinsMicrobial Sensitivity TestsMutant ProteinsMutation, MissenseAntiviral AgentsBacterial ProteinsCarrier Proteinscyanovirin Ngp120 protein, Human immunodeficiency virus 1griffithsin protein, GriffithsiaHIV Envelope Protein gp120LectinsMembrane ProteinsMutant ProteinsPlant Lectinsscytovirin protein, S variumCyanovirin-NEntry inhibitorGlycansGriffithsinHIV subtype CMicrobicideResistanceScytovirinSingle genome amplification

Identifiers

PMID24074568
PMCPMC3787538
OpenAlexW2037178882

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.