Evidence map›Paper›PMID 24074367›Full record

ArticleACS chemical biology2013

Discovery of a cAMP deaminase that quenches cyclic AMP-dependent regulation.

Alissa M Goble, Youjun Feng, Frank M Raushel, John E Cronan

Open access · greenAbstract read
In one paragraph

Article in ACS chemical biology, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
1.9field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 13 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 3 institutions in 2 countries.

Alissa M GobleDepartment of Chemistry, Texas A&M University , P.O. Box 30012, College Station, Texas 77843-3012, United States.
Youjun Feng
Frank M Raushel
John E Cronan
Texas A&M University · USCenter for Genomic Science · ITUniversity of Illinois Urbana-Champaign · US

Funding

Core H: MicrobiologyU54GM093342 · NIGMS · UNIVERSITY OF ILLINOIS AT URBANA-CHAMPAIGN · PI ALMO, STEVEN C. · 2010 to 2015
$34.6M
NIGMS NIH HHS U54 GM093342NIGMS NIH HHS U54GM093342
6 · The paper itself

Abstract

An enzyme of unknown function within the amidohydrolase superfamily was discovered to catalyze the hydrolysis of the universal second messenger, cyclic-3',5'-adenosine monophosphate (cAMP). The enzyme, which we have named CadD, is encoded by the human pathogenic bacterium Leptospira interrogans. Although CadD is annotated as an adenosine deaminase, the protein specifically deaminates cAMP to cyclic-3',5'-inosine monophosphate (cIMP) with a kcat/Km of 2.7 ± 0.4 × 10(5) M(-1) s(-1) and has no activity on adenosine, adenine, or 5'-adenosine monophosphate (AMP). This is the first identification of a deaminase specific for cAMP. Expression of CadD in Escherichia coli mimics the loss of adenylate cyclase in that it blocks growth on carbon sources that require the cAMP-CRP transcriptional activator complex for expression of the cognate genes. The cIMP reaction product cannot replace cAMP as the ligand for CRP binding to DNA in vitro and cIMP is a very poor competitor of cAMP activation of CRP for DNA binding. Transcriptional analyses indicate that CadD expression represses expression of several cAMP-CRP dependent genes. CadD adds a new activity to the cAMP metabolic network and may be a useful tool in intracellular study of cAMP-dependent processes.

Indexed as

Gene Expression Regulation, BacterialAdenineAdenosineAdenosine MonophosphateAdenylyl CyclasesAmino Acid SequenceBacterial ProteinsCyclic AMPCyclic AMP Receptor ProteinCyclic IMPDNA, BacterialEscherichia coliEscherichia coli ProteinsKineticsLeptospira interrogansMolecular Sequence DataAdenineAdenosineAdenosine MonophosphateAdenylyl CyclasesBacterial Proteinscrp protein, E coliCyclic AMPCyclic AMP Receptor ProteinCyclic IMPDNA, BacterialEscherichia coli ProteinsNucleotide DeaminasesRecombinant Proteins

Identifiers

PMID24074367
PMCPMC3880142
OpenAlexW2335048910

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.