Evidence map›Paper›PMID 24072711›Full record

ArticleThe Journal of biological chemistry2013

The SUMO1-E67 interacting loop peptide is an allosteric inhibitor of the dipeptidyl peptidases 8 and 9.

Esther Pilla, Markus Kilisch, Christof Lenz, Henning Urlaub, Ruth Geiss-Friedlander

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
1.7field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 26 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Review
  5. Article
  6. Structures and mechanism of dipeptidyl peptidases 8 and 9, important players in cellular homeostasis and cancer.Proceedings of the National Academy of Sciences of the United States of America · 2018
    Article
  7. Article
  8. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 1 country.

Esther PillaFrom the Department of Molecular Biology, Faculty of Medicine, Georg-August-University of Goettingen, 37073 Goettingen, Germany.
Markus KilischFrom the Department of Molecular Biology, Faculty of Medicine, Georg-August-University of Goettingen, 37073 Goettingen, Germany.
Christof Lenzthe Bioanalytical Mass Spectrometry Group, Max Planck Institute for Biophysical Chemistry, 37077 Goettingen, Germany; the Institute for Clinical Chemistry, Faculty of Medicine, Georg-August-University of Goettingen, 37075 Goettingen, Germany.
Henning Urlaubthe Bioanalytical Mass Spectrometry Group, Max Planck Institute for Biophysical Chemistry, 37077 Goettingen, Germany; the Institute for Clinical Chemistry, Faculty of Medicine, Georg-August-University of Goettingen, 37075 Goettingen, Germany.
Ruth Geiss-FriedlanderFrom the Department of Molecular Biology, Faculty of Medicine, Georg-August-University of Goettingen, 37073 Goettingen, Germany,. Electronic address: rgeiss@gwdg.de.
University of Göttingen · DEMax Planck Institute for Biophysical Chemistry · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The intracellular peptidases dipeptidyl peptidase (DPP) 8 and DPP9 are involved in multiple cellular pathways including antigen maturation, cellular homeostasis, energy metabolism, and cell viability. Previously we showed that the small ubiquitin-like protein modifier SUMO1 interacts with an armlike structure in DPP9, leading to allosteric activation of the peptidase. Here we demonstrate that the E67-interacting loop (EIL) peptide, which corresponds to the interaction surface of SUMO1 with DPP9, acts as a noncompetitive inhibitor of DPP9. Moreover, by analyzing the sensitivity of DPP9 arm mutants to the EIL peptide, we mapped specific residues in the arm that are important for inhibition by the EIL, suggesting that the peptide acts as an allosteric inhibitor of DPP9. By modifying the EIL peptide, we constructed peptide variants with more than a 1,000-fold selectivity toward DPP8 (147 nM) and DPP9 (170 nM) over DPPIV (200 μM). Furthermore, application of these peptides to cells leads to a clear inhibition of cellular prolyl peptidase activity. Importantly, in line with previous publications, inhibition of DPP9 with these novel allosteric peptide inhibitors leads to an increase in EGF-mediated phosphorylation of Akt. This work highlights the potential use of peptides that mimic interaction surfaces for modulating enzyme activity.

Indexed as

Allosteric RegulationDipeptidasesDipeptidyl-Peptidases and Tripeptidyl-PeptidasesDose-Response Relationship, DrugEpidermal Growth FactorHeLa CellsHumansPeptidesPhosphorylationProtease InhibitorsProtein Structure, SecondaryProto-Oncogene Proteins c-aktSUMO-1 ProteinDipeptidasesDipeptidyl-Peptidases and Tripeptidyl-PeptidasesDPP8 protein, humanDPP9 protein, humanEpidermal Growth FactorPeptidesProtease InhibitorsProto-Oncogene Proteins c-aktSUMO-1 ProteinAktDipeptidyl PeptidaseDPP8DPP9Enzyme InhibitorsEnzyme KineticsPeptidasesPeptide InteractionsProlylpeptidaseProtease Inhibitor

Identifiers

PMID24072711
PMCPMC3820912
OpenAlexW2117761827

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.