Evidence map›Paper›PMID 24070373›Full record

ArticleJournal of proteome research2014

Characterization, design, and function of the mitochondrial proteome: from organs to organisms.

Christopher Lotz, Amanda J Lin, Caitlin M Black, Jun Zhang, Edward Lau, Ning Deng, Yueju Wang, Nobel C Zong, Jeong H Choi, Tao Xu and 7 more

Open access · greenAbstract read
In one paragraph

Article in Journal of proteome research, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 34 papers.

0numbers the graph read from it
0cells of the map it votes in
34citing papers in PubMed
4.0field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

34 citing papers in PubMed, 66 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Review
  5. Review
  6. Review
  7. Article
  8. Mitochondrial effects on fertility and longevity inProceedings. Biological sciences · 2022
    Article
  9. Article
  10. Review
  11. Review
  12. Mitochondrial-Y chromosome epistasis inProceedings. Biological sciences · 2020
    Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. Mitochondrial calcium uniporter regulator 1 (MCUR1) regulates the calcium threshold for the mitochondrial permeability transition.Proceedings of the National Academy of Sciences of the United States of America · 2016
    Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

17 authors at 4 institutions in 3 countries.

Christopher LotzDepartments of Physiology and Medicine/Division of Cardiology, David Geffen School of Medicine at UCLA , 675 Charles E. Young Drive, MRL Building, Suite 1609, Los Angeles, California 90095, United States.
Amanda J Lin
Caitlin M Black
Jun Zhang
Edward Lau
Ning Deng
Yueju Wang
Nobel C Zong
Jeong H Choi
Tao Xu
David A Liem
Paavo Korge
James N Weiss
Henning Hermjakob
John R Yates
Rolf Apweiler
Peipei Ping
University of California, Los Angeles · USScripps Research Institute · USWellcome Trust · GBZhejiang University · CN

Funding

PKC EPSILON AND SRC PTK SIGNALING IN PRECONDITIONINGR01HL063901 · NHLBI · UNIVERSITY OF LOUISVILLE · PI PING, PEIPEI · 2000 to 2009
$3.3M
PKC epsilon and Src PTK Signaling in PreconditioningR37HL063901 · NHLBI · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI PING, PEIPEI · 2010 to 2016
$2.7M
Training in Molecular, Cellular &Integrative PhysiologyT32GM065823 · NIGMS · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI TIDBALL, JAMES G · 2003 to 2017
$2.1M
NHLBI NIH HHS HHSN268201000035CNHLBI NIH HHS HL-63901NHLBI NIH HHS R01 HL063901NHLBI NIH HHS R37 HL063901NIGMS NIH HHS T32 GM065823
6 · The paper itself

Abstract

Mitochondria are a common energy source for organs and organisms; their diverse functions are specialized according to the unique phenotypes of their hosting environment. Perturbation of mitochondrial homeostasis accompanies significant pathological phenotypes. However, the connections between mitochondrial proteome properties and function remain to be experimentally established on a systematic level. This uncertainty impedes the contextualization and translation of proteomic data to the molecular derivations of mitochondrial diseases. We present a collection of mitochondrial features and functions from four model systems, including two cardiac mitochondrial proteomes from distinct genomes (human and mouse), two unique organ mitochondrial proteomes from identical genetic codons (mouse heart and mouse liver), as well as a relevant metazoan out-group (drosophila). The data, composed of mitochondrial protein abundance and their biochemical activities, capture the core functionalities of these mitochondria. This investigation allowed us to redefine the core mitochondrial proteome from organs and organisms, as well as the relevant contributions from genetic information and hosting milieu. Our study has identified significant enrichment of disease-associated genes and their products. Furthermore, correlational analyses suggest that mitochondrial proteome design is primarily driven by cellular environment. Taken together, these results connect proteome feature with mitochondrial function, providing a prospective resource for mitochondrial pathophysiology and developing novel therapeutic targets in medicine.

Indexed as

ProteomeAnimalsChromatography, LiquidDrosophila melanogasterElectrophoresis, Polyacrylamide GelHumansMiceMitochondrial ProteinsTandem Mass SpectrometryMitochondrial ProteinsProteome

Identifiers

PMID24070373
PMCPMC4076470
OpenAlexW2014956012

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.