Evidence map›Paper›PMID 24070067›Full record

ArticleACS chemical biology2013

Fluorescence linked enzyme chemoproteomic strategy for discovery of a potent and selective DAPK1 and ZIPK inhibitor.

David A Carlson, Aaron S Franke, Douglas H Weitzel, Brittany L Speer, Philip F Hughes, Laura Hagerty, Christopher N Fortner, James M Veal, Thomas E Barta, Bartosz J Zieba and 6 more

Open access · greenAbstract read
In one paragraph

Article in ACS chemical biology, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 25 papers.

0numbers the graph read from it
0cells of the map it votes in
25citing papers in PubMed
1.9field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

25 citing papers in PubMed, 49 citations in OpenAlex.

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  17. Chemical Proteomic Profiling of Human Methyltransferases.Journal of the American Chemical Society · 2016
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

16 authors at 4 institutions in 2 countries.

David A CarlsonDepartment of Pharmacology and Cancer Biology, Duke University Medical Center , Durham, North Carolina 27710, United States.
Aaron S Franke
Douglas H Weitzel
Brittany L Speer
Philip F Hughes
Laura Hagerty
Christopher N Fortner
James M Veal
Thomas E Barta
Bartosz J Zieba
Avril V Somlyo
Cindy Sutherland
Jing Ti Deng
Michael P Walsh
Justin A MacDonald
Timothy A J Haystead
Duke Medical Center · USDuke University Hospital · USUniversity of Calgary · CAUniversity of Virginia · US

Funding

Center for Molecular &Cellular Studies of Ped DiseaseK12HD043494 · NICHD · DUKE UNIVERSITY · PI REED, ANN M. · 2003 to 2017
$5.2M
A Method to Stop HIV Replication:Inhibition of Human Purine Utilizing ProteinsR01AI090644 · NIAID · OHIO STATE UNIVERSITY · PI KWIEK, JESSE J · 2010 to 2013
$1.8M
Myosin phosphatase autoinhibition in gastrointestinal smooth muscle contractionR01DK088905 · NIDDK · UNIVERSITY OF VIRGINIA · PI ETO, MASUMI, SOMLYO, AVRIL V. · 2010 to 2012
$1.1M
CIHR MOP-111262NIAID NIH HHS R01 AI090644NICHD NIH HHS K12 HD043494NIDDK NIH HHS R01 DK088905
6 · The paper itself

Abstract

DAPK1 and ZIPK (also called DAPK3) are closely related serine/threonine protein kinases that regulate programmed cell death and phosphorylation of non-muscle and smooth muscle myosin. We have developed a fluorescence linked enzyme chemoproteomic strategy (FLECS) for the rapid identification of inhibitors for any element of the purinome and identified a selective pyrazolo[3,4-d]pyrimidinone (HS38) that inhibits DAPK1 and ZIPK in an ATP-competitive manner at nanomolar concentrations. In cellular studies, HS38 decreased RLC20 phosphorylation. In ex vivo studies, HS38 decreased contractile force generated in mouse aorta, rabbit ileum, and calyculin A stimulated arterial muscle by decreasing RLC20 and MYPT1 phosphorylation. The inhibitor also promoted relaxation in Ca(2+)-sensitized vessels. A close structural analogue (HS43) with 5-fold lower affinity for ZIPK produced no effect on cells or tissues. These findings are consistent with a mechanism of action wherein HS38 specifically targets ZIPK in smooth muscle. The discovery of HS38 provides a lead scaffold for the development of therapeutic agents for smooth muscle related disorders and a chemical means to probe the function of DAPK1 and ZIPK across species.

Indexed as

Adenosine TriphosphateAnimalsAortaBinding, CompetitiveCalciumDeath-Associated Protein KinasesGreen Fluorescent ProteinsHEK293 CellsHigh-Throughput Screening AssaysHumansIleumMiceMuscle ContractionMuscle, SmoothMyocytes, Smooth MuscleMyosin-Light-Chain Kinase(2-((1-(3-chlorophenyl)-4-oxo-4,5-dihydro-1H-pyrazolo(3,4-d)pyrimidin-6-yl)thio)propanamideAdenosine TriphosphateCalciumDAPK1 protein, humanDapk3 protein, mouseDeath-Associated Protein KinasesGreen Fluorescent ProteinsMyosin-Light-Chain KinaseMyosin-Light-Chain PhosphatasePpp1r12a protein, mouseProtein Kinase InhibitorsPyrazolesPyrimidinonesRecombinant Fusion Proteins

Identifiers

PMID24070067
PMCPMC4445880
OpenAlexW2074446289

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.