ArticleMolecular biology reports2013
Molecular phylogeny of Indian horse breeds with special reference to Manipuri pony based on mitochondrial D-loop.
Article in Molecular biology reports, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.
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Who cites it
6 citing papers in PubMed, 16 citations in OpenAlex.
- A Systematic Literature Review of Mitochondrial DNA Analysis for Horse Genetic Diversity.Animals : an open access journal from MDPI · 2025Review
- Unraveling the maternal heritage: identifying the complex origins of indigenous Indian horse and pony breeds through mitochondrial genome analysis.Mammalian genome : official journal of the International Mammalian Genome Society · 2025Article
- Advancing equine genomics: the development of a high density Axiom_Ashwa SNP chip for Indian horses and ponies.Functional & integrative genomics · 2024Article
- Mitochondrial DNA D-loop hyper-variable region 1 variability in Kurdish horse breed.Veterinary medicine and science · 2023Article
- Article
- D-loop haplotype diversity in Brazilian horse breeds.Genetics and molecular biologyArticle
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Authors and funding
2 authors at 1 institution in 1 country.
Funding
No grant is acknowledged in the PubMed record.
Abstract
Manipuri pony is the geographically distant breed of horse from the five recognized horse breeds found in the Indian subcontinent. The phylogenetic relationship of Manipuri pony with the other breeds is unknown. The diversity in the mitochondrial (mt) DNA D-loop region is employed as an important tool to understand the origin and genetic diversification of domestic horses and to examine genetic relationships among breeds around the world. This study was carried out to understand the maternal lineages of Manipuri pony using the 247 bp region of the mtDNA D-loop. The dataset comprised of eleven numbers of self developed sequences of Manipuri pony, 59 and 35 number of retrieved sequences of Indian horse breeds and other worldwide breeds respectively. A total of 35 haplotypes was identified with a high level of genetic diversity in the Indian breeds. A total of seven major mtDNA haplogroups (A-G) was identified in the Indian horse breeds that indicated the abundance of mtDNA diversity and multiple origins of maternal lineages in them. The majority of the studied sequences of Indian breeds (33.3 %) were grouped into haplogroup D and least (3.9 %) in haplogroup E. The Manipuri breed showed the least FST distance (0.03866) with the most diverged Indian breeds and with Thoroughbred horse among the worldwide. This study indicated a close association between Manipuri pony and Thoroughbred.
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