Evidence map›Paper›PMID 24068343›Full record

ArticleTAG. Theoretical and applied genetics. Theoretische und angewandte Genetik2013

Fine mapping of the Rrs1 resistance locus against scald in two large populations derived from Spanish barley landraces.

Kerstin Hofmann, Cristina Silvar, Ana M Casas, Markus Herz, Bianca Büttner, M Pilar Gracia, Bruno Contreras-Moreira, Hugh Wallwork, Ernesto Igartua, Günther Schweizer

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Article in TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed
5.1field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed, 41 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Review
  5. Review
  6. Identification of sources of resistance to scald (Frontiers in plant science · 2023
    Article
  7. Pyramiding of scald resistance genes in four spring barley MAGIC populations.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2021
    Article
  8. Article
  9. Review
  10. Article
  11. Article
  12. Article
  13. Characterisation of barley resistance to rhynchosporium on chromosome 6HS.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2019
    Article
  14. Resistance to Rhynchosporium commune in a collection of European spring barley germplasm.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2018
    Article
  15. Review
  16. Review
  17. Article
  18. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 4 institutions in 3 countries.

Kerstin HofmannBavarian State Research Center for Agriculture, Institute for Crop Science and Plant Breeding, 85354, Freising, Germany.
Cristina Silvar
Ana M Casas
Markus Herz
Bianca Büttner
M Pilar Gracia
Bruno Contreras-Moreira
Hugh Wallwork
Ernesto Igartua
Günther Schweizer
Bavarian State Research Center for Agriculture · DEEstación Experimental de Aula Dei · ESFundacion Agencia Aragonesa para la Investigacion y el Desarrollo · ESUniversity of Adelaide · AU

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

key messageIn two Spanish barley landraces with outstanding resistance to scald, the Rrs1 Rh4 locus was fine mapped including all known markers used in previous studies and closely linked markers were developed. Scald, caused by Rhynchosporium commune, is one of the most prevalent barley diseases worldwide. A search for new resistance sources revealed that Spanish landrace-derived lines SBCC145 and SBCC154 showed outstanding resistance to scald. They were crossed to susceptible cultivar Beatrix to create large DH-mapping populations of 522 and 416 DH lines that were scored for disease resistance in the greenhouse using two R. commune isolates. To ascertain the pattern of resistance, parents and reference barley lines with known scald resistance were phenotyped with a panel of differential R. commune isolates. Subpopulations were genotyped with the Illumina GoldenGate 1,536 SNP Assay and a large QTL in the centromeric region of chromosome 3H, known to harbour several scald resistance genes and/or alleles, was found in both populations. Five SNP markers closest to the QTL were converted into CAPS markers. These CAPS markers, together with informative SSR markers used in other scald studies, confirmed the presence of the Rrs1 locus. The panel of differential scald isolates indicated that the allele carried by both donors was Rrs1 Rh4 . The genetic distance between Rrs1 and its flanking markers was 1.2 cM (11_0010) proximally and 0.9 cM (11_0823) distally, which corresponds to a distance of just below 9 Mbp. The number and nature of scald resistance genes on chromosome 3H are discussed. The effective Rrs1 allele found and the closely linked markers developed are already useful tools for molecular breeding programs and provide a good step towards the identification of candidate genes.

Indexed as

Chromosome MappingGenetics, PopulationAscomycotaChromosomes, PlantDisease ResistanceDNA, PlantGenes, PlantGenetic MarkersHordeumImmunity, InnateMicrosatellite RepeatsPlant DiseasesDNA, PlantGenetic Markers

Identifiers

PMID24068343
OpenAlexW2059250093

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.