Evidence map›Paper›PMID 24067983›Full record

ArticleJournal of virology2013

Recombination can lead to spurious results in retroviral transduction with dually fluorescent reporter genes.

Daniel J Salamango, David A Evans, Mariju F Baluyot, Jackson N Furlong, Marc C Johnson

Open access · bronzeAbstract read
In one paragraph

Article in Journal of virology, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
0.9field-weighted citation impact, top 18% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 13 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Daniel J SalamangoDepartment of Molecular Microbiology and Immunology, University of Missouri, Columbia, Missouri, USA.
David A Evans
Mariju F Baluyot
Jackson N Furlong
Marc C Johnson
University of Missouri · US

Funding

Elucidation of HIV Env acquisition strategiesR01AI073098 · NIAID · UNIVERSITY OF MISSOURI-COLUMBIA · PI JOHNSON, MARC C · 2008 to 2012
$1.5M
Elucidation of HIV Env acquisition strategiesR01GM110776 · NIGMS · UNIVERSITY OF MISSOURI-COLUMBIA · PI JOHNSON, MARC C · 2013 to 2016
$1.2M
NIAID NIH HHS AI73098NIAID NIH HHS R01 AI073098NIGMS NIH HHS GM110776NIGMS NIH HHS R01 GM110776
6 · The paper itself

Abstract

Fluorescent proteins are routinely employed as reporters in retroviral vectors. Here, we demonstrate that transduction with retroviral vectors carrying a tandem-dimer Tomato (TdTom) reporter produces two distinct fluorescent cell populations following template jumping due to a single nucleotide polymorphism between the first and second Tomato genes. Template jumping also occurs between repeated sequences in the Tomato and green fluorescent protein (GFP) genes. Thus, proper interpretation of the fluorescence intensity of transduced cells requires caution.

Indexed as

Genes, ReporterRecombination, GeneticTransduction, GeneticGenetic VectorsGene Transfer TechniquesHEK293 CellsHumansLeukemia Virus, MurineLuminescent ProteinsVirus IntegrationLuminescent Proteins

Identifiers

PMID24067983
PMCPMC3838247
OpenAlexW2158023209

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.