Evidence map›Paper›PMID 24066093›Full record

ArticlePloS one2013

SMAD7 variant rs4939827 is associated with colorectal cancer risk in Croatian population.

Iva Kirac, Petar Matošević, Goran Augustin, Iva Šimunović, Vedran Hostić, Sven Župančić, Caroline Hayward, Natasa Antoljak, Igor Rudan, Harry Campbell and 4 more

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers, 4 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed, 4 pooled it
1.5field-weighted citation impact, top 18% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 4 syntheses or guidelines pooled it, 12 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 6 institutions in 4 countries.

Iva KiracDepartment of Surgical Oncology, University Hospital for Tumours, Sestre milosrdnice University Hospital Centre, Zagreb, Croatia.
Petar Matošević
Goran Augustin
Iva Šimunović
Vedran Hostić
Sven Župančić
Caroline Hayward
Natasa Antoljak
Igor Rudan
Harry Campbell
Malcolm G Dunlop
Danko Velimir Vrdoljak
Dujo Kovačević
Lina Zgaga
University Hospital Centre Zagreb · HRUniversity of Edinburgh · GBDeutsches Herzzentrum München · DEHrvatski zavod za javno zdravstvo · HRMRC Institute of Genetics and Molecular Medicine · GBTrinity College Dublin · IE

Funding

Cancer Research UK 12076Medical Research Council MC_PC_U127561128Medical Research Council MC_U127527198Wellcome Trust 095831
6 · The paper itself

Abstract

backgroundTwenty common genetic variants have been associated with risk of developing colorectal cancer (CRC) in genome wide association studies to date. Since large differences between populations exist, generalisability of findings to any specific population needs to be confirmed.

aimThe aim of this study was to perform an association study between risk variants: rs10795668, rs16892766, rs3802842 and rs4939827 and CRC risk in Croatian population.

methodsAn association study was performed on 320 colorectal cancer cases and 594 controls recruited in Croatia. We genotyped four variants previously associated with CRC: rs10795668, rs16892766, rs3802842 and rs4939827.

resultsSMAD7 variant rs4939827 (18q21.1) was significantly associated with CRC risk in Croatian population. C allele was associated with a decreased risk, odds ratio (OR): 0.70 (95% CI: 0.57-0.85, P=3.5E-04). Compared to TT homozygotes, risk was reduced by 34% in heterozygotes (OR=0.66, 95% CI: 0.47-0.92) and by 52% in CC homozygotes (OR=0.48, 95% CI: 0.33-0.72).

conclusionOur results show association of rs4939827 with colorectal cancer risk in Croatian population. The higher strength of the association in comparison to other studies suggests population-specific environmental or genetic factors may be modifying the association. More studies are needed to further describe role of rs4939827 in CRC. Likely reason for failure of replication for other 3 loci is inadequate study power.

Indexed as

AgedColorectal NeoplasmsCroatiaFemaleGenetic Predisposition to DiseaseGenetic VariationGenotypeHeterozygoteHumansMaleMiddle AgedSmad7 ProteinSmad7 ProteinSMAD7 protein, human

Identifiers

PMID24066093
PMCPMC3774761
OpenAlexW2138815690

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.