ArticleMolecular biology reports2013
Long non-coding genes implicated in response to stripe rust pathogen stress in wheat (Triticum aestivum L.).
Article in Molecular biology reports, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 47 papers, 1 of them a synthesis that pooled it.
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Who cites it
47 citing papers in PubMed, 1 synthesis or guideline pooled it, 103 citations in OpenAlex.
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- Plant long noncoding RNAs: why do we not know more?Biological research · 2025Review
- Genome-wide analysis of lncRNA in wheat (Frontiers in plant science · 2025Article
- Biological Insights and Recent Advances in Plant Long Non-Coding RNA.International journal of molecular sciences · 2024Review
- Transcriptomic and epigenetic responses shed light on soybean resistance to Phytophthora sansomeana.The plant genome · 2024Article
- Identification and analysis of short-term and long-term salt-associated lncRNAs in the leaf of Avicennia marina.BMC plant biology · 2024Article
- An update on the secretory functions of brown, white, and beige adipose tissue: Towards therapeutic applications.Reviews in endocrine & metabolic disorders · 2024Review
- Insights into the roles of long noncoding RNAs in the communication between plants and the environment.The plant genome · 2023Review
- Roles of long non-coding RNAs in plant immunity.PLoS pathogens · 2023Review
- Mining of long non-coding RNAs with target genes in response to rust based on full-length transcriptome in Kentucky bluegrass.Frontiers in plant science · 2023Article
- Genome-wide identification and characterization ofFrontiers in plant science · 2023Article
- Global Identification of White Lupin lncRNAs Reveals Their Role in Cluster Roots under Phosphorus Deficiency.International journal of molecular sciences · 2022Article
- Epigenetics of wheat-rust interaction: an update.Planta · 2022Review
- Long Non-Coding RNAs as Emerging Regulators of Pathogen Response in Plants.Non-coding RNA · 2022Review
- Epigenetic regulation of salinity stress responses in cereals.Molecular biology reports · 2022Review
- Genome-wide identification, characterization, and functional analysis of lncRNAs inFrontiers in plant science · 2022Article
- Identification of Long Non-coding RNA Transcripts inIranian journal of biotechnology · 2022Article
- Genome-Wide Identification of Powdery Mildew Responsive Long Non-Coding RNAs inFrontiers in genetics · 2022Article
- Fungi Inhabiting the Wheat Endosphere.Pathogens (Basel, Switzerland) · 2021Review
Corrections and comments
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Authors and funding
8 authors at 1 institution in 1 country.
Funding
No grant is acknowledged in the PubMed record.
Abstract
The non-protein-coding genes have been reported as a critical control role in the regulation of gene expression in abiotic stress. We previously identified four expressed sequence tags numbered S18 (EL773024), S73 (EL773035), S106 (EL773041) and S108 (EL773042) from a SSH-cDNA library of bread wheat Shaanmai 139 infected with Puccinia striiformis f. sp. tritici (Pst). Here, we isolated four cDNA clones and referred them as TalncRNA18, TalncRNA73, TalncRNA106 and TalncRNA108 (GenBank: KC549675-KC549678). These cDNA separately consisted of 1,393, 667, 449 and 647 nucleotides but without any open reading frame. The alignment result showed that TalncRNA18 is a partial cDNA of E3 ubiquitin-protein ligase UPL1-like gene, TalncRNA73 is an antisense transcript of hypothetical protein, TalncRNA108 is a homolog to RRNA intron-encoded homing endonuclease, and lncRNA106 had no similarly sequence. Quantitative RT-PCR studies confirmed that these four lncRNAs were differentially expressed in three near isogenic lines. TalncRNA108 was significantly stepwise decreased at early stage of inoculation with Pst, while the others were upregulated, especially at 1 and 3 dpi (days post-inoculation). Using Chinese Spring nulli-tetrasomic lines and its ditelosomic lines, TalncRNA73 and TalncRNA108 were located to wheat chromosome 7A and the short arm of chromosome 4B, respectively, while TalncRNA18 and TalncRNA106 were located to chromosome 5B. Comparing the sequence of DNA and cDNA of four lncRNAs with polymerase chain reaction primers, the results showed that all of them have no introns. The kinetics analyses of lncRNAs expression as a result of pathogen challenge in immune resistant genotype indicated that they may play the roles of modulating or silencing the protein-coding gene into pathogen-defence response.
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