Evidence map›Paper›PMID 24065176›Full record

ArticleGlycoconjugate journal2014

Human tandem-repeat-type galectins bind bacterial non-βGal polysaccharides.

Yu A Knirel, H-J Gabius, O Blixt, E M Rapoport, N R Khasbiullina, N V Shilova, N V Bovin

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In one paragraph

Article in Glycoconjugate journal, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
1.9field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 33 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Examining Galectin Binding Specificity Using Glycan Microarrays.Methods in molecular biology (Clifton, N.J.) · 2022
    Article
  6. Article
  7. Glycan Array Technology.Advances in biochemical engineering/biotechnology · 2021
    Article
  8. Article
  9. Microbe-focused glycan array screening platform.Proceedings of the National Academy of Sciences of the United States of America · 2019
    Article
  10. Review
  11. Recognition of microbial glycans by soluble human lectins.Current opinion in structural biology · 2017
    Review
  12. Article
  13. Article
  14. Innate immunity against molecular mimicry: Examining galectin-mediated antimicrobial activity.BioEssays : news and reviews in molecular, cellular and developmental biology · 2015
    Review
  15. Examining galectin binding specificity using glycan microarrays.Methods in molecular biology (Clifton, N.J.) · 2015
    Article
  16. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 5 institutions in 3 countries.

Yu A KnirelN. D. Zelinsky Institute of Organic Chemistry, Russian Academy of Sciences, Leninsky prosp., 47, Moscow, 119991, Russian Federation.
H-J Gabius
O Blixt
E M Rapoport
N R Khasbiullina
N V Shilova
N V Bovin
Institute of Bioorganic Chemistry · RURussian Academy of Sciences · RULudwig-Maximilians-Universität München · DEN.D. Zelinsky Institute of Organic Chemistry · RUUniversity of Copenhagen · DK

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Galectins are multifunctional effectors, for example acting as regulators of cell growth via protein-glycan interactions. The observation of capacity to kill bacteria for two tandem-repeat-type galectins, which target histo-blood epitopes toward this end (Stowell et al. Nat. Med. 16:295-301, 2010), prompted us to establish an array with bacterial polysaccharides. We addressed the question whether sugar determinants other than β-galactosides may be docking sites, using human galectins-4, -8, and -9. Positive controls with histo-blood group ABH-epitopes and the E. coli 086 polysaccharide ascertained the suitability of the set-up. Significant signal generation, depending on type of galectin and polysacchride, was obtained. Presence of cognate β-galactoside-related epitopes within a polysaccharide chain or its branch will not automatically establish binding properties, and structural constellations lacking galactosides, like rhamnan, were found to be active. These data establish the array as valuable screening tool, giving direction to further functional and structural studies.

Indexed as

Binding SitesEpitopesGalactosidesGalectinsHumansPolysaccharides, BacterialProtein BindingRepetitive Sequences, Amino AcidRhamnoseEpitopesGalactosidesGalectinsPolysaccharides, BacterialRhamnose

Identifiers

PMID24065176
OpenAlexW1989555114

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.