Evidence map›Paper›PMID 24065131›Full record

ArticleThe EMBO journal2013

Antagonistic functions between the RNA chaperone Hfq and an sRNA regulate sensitivity to the antibiotic colicin.

Hubert Salvail, Marie-Pier Caron, Justine Bélanger, Eric Massé

Open access · bronzeAbstract read
In one paragraph

Article in The EMBO journal, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 61 papers.

0numbers the graph read from it
0cells of the map it votes in
61citing papers in PubMed
4.9field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

61 citing papers in PubMed, 100 citations in OpenAlex.

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  18. Recent Advances in the Siderophore Biology ofFrontiers in microbiology · 2022
    Review
  19. Article
  20. Article

1 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Hubert SalvailDepartment of Biochemistry, RNA Group, University of Sherbrooke, Sherbrooke, Quebec, Canada.
Marie-Pier Caron
Justine Bélanger
Eric Massé
Université de Sherbrooke · CA

Funding

Canadian Institutes of Health Research MOP69005
6 · The paper itself

Abstract

The RNA chaperone Hfq is a key regulator of the function of small RNAs (sRNAs). Hfq has been shown to facilitate sRNAs binding to target mRNAs and to directly regulate translation through the action of sRNAs. Here, we present evidence that Hfq acts as the repressor of cirA mRNA translation in the absence of sRNA. Hfq binding to cirA prevents translation initiation, which correlates with cirA mRNA instability. In contrast, RyhB pairing to cirA mRNA promotes changes in RNA structure that displace Hfq, thereby allowing efficient translation as well as mRNA stabilization. Because CirA is a receptor for the antibiotic colicin Ia, in addition to acting as an Fur (Ferric Uptake Regulator)-regulated siderophore transporter, translational activation of cirA mRNA by RyhB promotes colicin sensitivity under conditions of iron starvation. Altogether, these results indicate that Fur and RyhB modulate an unexpected feed-forward loop mechanism related to iron physiology and colicin sensitivity.

Indexed as

Gene Expression Regulation, BacterialTranscriptional ActivationBase SequenceColicinsEscherichia coliEscherichia coli ProteinsHost Factor 1 ProteinIronMolecular ChaperonesMolecular Sequence DataProtein BindingProtein BiosynthesisReceptors, Cell SurfaceRibosome Subunits, Small, BacterialRNA, Bacterialcolicin receptor, E coliColicinsEscherichia coli ProteinsHfq protein, E coliHost Factor 1 ProteinIronMolecular ChaperonesReceptors, Cell SurfaceRNA, Bacterial

Identifiers

PMID24065131
PMCPMC3801439
OpenAlexW1971682695

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.