Evidence map›Paper›PMID 24065103›Full record

ArticleInternational journal of molecular sciences2013

Basic amino acid residues of human eosinophil derived neurotoxin essential for glycosaminoglycan binding.

Ta-Jen Hung, Wei-Tang Chang, Noboru Tomiya, Yuan-Chuan Lee, Hao-Teng Chang, Chien-Jung Chen, Ping-Hsueh Kuo, Tan-chi Fan, Margaret Dah-Tsyr Chang

Open access · goldAbstract read
In one paragraph

Article in International journal of molecular sciences, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
0.2field-weighted citation impact, top 44% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 3 citations in OpenAlex.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 4 institutions in 2 countries.

Ta-Jen HungInstitute of Molecular and Cellular Biology, National Tsing Hua University, Hsinchu 300, Taiwan. dtchang@life.nthu.edu.tw.
Wei-Tang Chang
Noboru Tomiya
Yuan-Chuan Lee
Hao-Teng Chang
Chien-Jung Chen
Ping-Hsueh Kuo
Tan-chi Fan
Margaret Dah-Tsyr Chang
National Tsing Hua University · TWJohns Hopkins University · USChang Gung Memorial Hospital · TWChina Medical University · TW

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Human eosinophil derived neurotoxin (EDN), a granule protein secreted by activated eosinophils, is a biomarker for asthma in children. EDN belongs to the human RNase A superfamily possessing both ribonucleolytic and antiviral activities. EDN interacts with heparin oligosaccharides and heparin sulfate proteoglycans on bronchial epithelial Beas-2B cells. In this study, we demonstrate that the binding of EDN to cells requires cell surface glycosaminoglycans (GAGs), and the binding strength between EDN and GAGs depends on the sulfation levels of GAGs. Furthermore, in silico computer modeling and in vitro binding assays suggest critical roles for the following basic amino acids located within heparin binding regions (HBRs) of EDN 34QRRCKN39 (HBR1), 65NKTRKN70 (HBR2), and 113NRDQRRD119 (HBR3) and in particular Arg35, Arg36, and Arg38 within HBR1, and Arg114 and Arg117 within HBR3. Our data suggest that sulfated GAGs play a major role in EDN binding, which in turn may be related to the cellular effects of EDN.

Indexed as

Amino Acids, BasicAmino Acid SequenceAnimalsBinding SitesCell LineCHO CellsCricetinaeCricetulusEosinophil-Derived NeurotoxinEosinophilsGlycosaminoglycansHeparinHumansMaltose-Binding ProteinsMolecular Docking SimulationProtein BindingAmino Acids, BasicEosinophil-Derived NeurotoxinGlycosaminoglycansHeparinMaltose-Binding Proteins

Identifiers

PMID24065103
PMCPMC3794821
OpenAlexW1980044012

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.