Evidence map›Paper›PMID 24064762›Full record

ArticleNature communications2013

Microbiome remodelling leads to inhibition of intestinal farnesoid X receptor signalling and decreased obesity.

Fei Li, Changtao Jiang, Kristopher W Krausz, Yunfei Li, Istvan Albert, Haiping Hao, Kristin M Fabre, James B Mitchell, Andrew D Patterson, Frank J Gonzalez

Open access · bronzeAbstract read
In one paragraph

Article in Nature communications, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 393 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
393citing papers in PubMed, 1 pooled it
18.4field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

393 citing papers in PubMed, 1 synthesis or guideline pooled it, 684 citations in OpenAlex.

  1. Pooled it
  2. Trial
  3. Review
  4. Article
  5. Article
  6. Bile acid signaling in health and disease.Molecular biomedicine · 2026
    Review
  7. Article
  8. Article
  9. Review
  10. Article
  11. Article
  12. Review
  13. Article
  14. Review
  15. Propionic acid secreted byLife metabolism · 2026
    Article
  16. Article
  17. Article
  18. Review
  19. Review
  20. The bile acid-gut microbiota-vitamin D axis: new insights into biliary atresia.Frontiers in cellular and infection microbiology · 2026
    Review

333 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 4 institutions in 1 country.

Fei Li1] Laboratory of Metabolism, Center for Cancer Research, National Cancer Institute, National Institutes of Health, Bethesda, Maryland 20892, USA [2].
Changtao Jiang
Kristopher W Krausz
Yunfei Li
Istvan Albert
Haiping Hao
Kristin M Fabre
James B Mitchell
Andrew D Patterson
Frank J Gonzalez
National Institutes of Health · USPennsylvania State University · USCenter for Cancer Research · USNational Cancer Institute · US

Funding

Xenobiotic receptorsZIABC005562 · NCI · DIVISION OF BASIC SCIENCES - NCI · PI GONZALEZ, FRANK J · 2009 to 2025
$26.9M
Xenobiotic ReceptorsZIABC005708 · NCI · DIVISION OF BASIC SCIENCES - NCI · PI GONZALEZ, FRANK J · 2009 to 2025
$16.4M
Nitroxides as Protectors Against Oxidative StressZIASC006387 · NCI · DIVISION OF CLINICAL SCIENCES - NCI · PI MITCHELL, JAMES · 2009 to 2025
$6.9M
Intramural NIH HHS ZIA BC005562Intramural NIH HHS ZIA BC005708
6 · The paper itself

Abstract

The antioxidant tempol reduces obesity in mice. Here we show that tempol alters the gut microbiome by preferentially reducing the genus Lactobacillus and its bile salt hydrolase (BSH) activity leading to the accumulation of intestinal tauro-β-muricholic acid (T-β-MCA). T-β-MCA is an farnesoid X receptor (FXR) nuclear receptor antagonist, which is involved in the regulation of bile acid, lipid and glucose metabolism. Its increased levels during tempol treatment inhibit FXR signalling in the intestine. High-fat diet-fed intestine-specific Fxr-null (Fxr(ΔIE)) mice show lower diet-induced obesity, similar to tempol-treated wild-type mice. Further, tempol treatment does not decrease weight gain in Fxr(ΔIE) mice, suggesting that the intestinal FXR mediates the anti-obesity effects of tempol. These studies demonstrate a biochemical link between the microbiome, nuclear receptor signalling and metabolic disorders, and suggest that inhibition of FXR in the intestine could be a target for anti-obesity drugs.

Indexed as

AmidohydrolasesAnimalsAnti-Obesity AgentsAntioxidantsBacterial ProteinsCyclic N-OxidesDiet, High-FatGene Expression RegulationGlucoseIntestinal AbsorptionIntestinal MucosaIntestinesLactobacillusLipid MetabolismMaleMiceAmidohydrolasesAnti-Obesity AgentsAntioxidantsBacterial Proteinscholoylglycine hydrolaseCyclic N-OxidesGlucoseReceptor, Farnesoid X-ActivatedReceptors, Cytoplasmic and NuclearSpin LabelsTaurocholic Acidtauromuricholic acidtempol

Identifiers

PMID24064762
PMCPMC6595219
OpenAlexW2065147071

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.