Evidence map›Paper›PMID 24064691›Full record

ArticleThe Journal of clinical endocrinology and metabolism2013

Genomic basis of aromatase excess syndrome: recombination- and replication-mediated rearrangements leading to CYP19A1 overexpression.

Maki Fukami, Takayoshi Tsuchiya, Heike Vollbach, Kristy A Brown, Shuji Abe, Shigeyuki Ohtsu, Martin Wabitsch, Henry Burger, Evan R Simpson, Akihiro Umezawa and 5 more

Open access · bronzeAbstract readCase Reports
In one paragraph

Article in The Journal of clinical endocrinology and metabolism, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
1.9field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 27 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Review
  6. Prepubertal unilateral gynecomastia: report of 2 cases.Journal of clinical research in pediatric endocrinology · 2014
    Article
  7. Review
  8. Review
  9. Review
  10. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors at 6 institutions in 3 countries.

Maki FukamiMD, Department of Molecular Endocrinology, National Research Institute for Child Health and Development, 2-10-1 Ohkura, Setagaya, Tokyo 157-8535, Japan. fukami-m@ncchd.go.jp.
Takayoshi Tsuchiya
Heike Vollbach
Kristy A Brown
Shuji Abe
Shigeyuki Ohtsu
Martin Wabitsch
Henry Burger
Evan R Simpson
Akihiro Umezawa
Daizou Shihara
Kazuhiko Nakabayashi
Serdar E Bulun
Makio Shozu
Tsutomu Ogata
National Center For Child Health and Development · JPMonash Medical Centre · AUChiba University · JPHakodate National Hospital · JPKitasato University · JPNorthwestern University · US

Funding

Endometriosis and RetinoidsR37HD038691 · NICHD · NORTHWESTERN UNIVERSITY AT CHICAGO · PI BULUN, SERDAR E. · 2010 to 2019
$4.5M
NICHD NIH HHS R37 HD038691
6 · The paper itself

Abstract

contextGenomic rearrangements at 15q21 have been shown to cause overexpression of CYP19A1 and resultant aromatase excess syndrome (AEXS). However, mutation spectrum, clinical consequences, and underlying mechanisms of these rearrangements remain to be elucidated.

objectiveThe aim of the study was to clarify such unsolved matters. DESIGN, SETTING, AND

methodsWe characterized six new rearrangements and investigated clinical outcome and local genomic environments of these rearrangements and of three previously reported duplications/deletions.

resultsNovel rearrangements included simple duplication involving exons 1-10 of CYP19A1 and simple and complex rearrangements that presumably generated chimeric genes consisting of the coding region of CYP19A1 and promoter-associated exons of neighboring genes. Clinical severities were primarily determined by the copy number of CYP19A1 and the property of the fused promoters. Sequences at the fusion junctions suggested nonallelic homologous recombination, nonhomologous end-joining, and replication-based errors as the underlying mechanisms. The breakpoint-flanking regions were not enriched with GC content, palindromes, noncanonical DNA structures, or known rearrangement-associated motifs. The rearrangements resided in early-replicating segments.

conclusionsThese results indicate that AEXS is caused by duplications involving CYP19A1 and simple and complex rearrangements that presumably lead to the usage of cryptic promoters of several neighboring genes. Our data support the notion that phenotypes depend on the dosage of CYP19A1 and the characteristics of the fused promoters. Furthermore, we show that the rearrangements in AEXS are generated by both recombination- and replication-mediated mechanisms, independent of the known rearrangement-inducing DNA features or late-replication timing. Thus, AEXS represents a unique model for human genomic disorders.

Indexed as

Gene Rearrangement46, XX Disorders of Sex DevelopmentAdolescentAdultAromataseChildDNA ReplicationGene DeletionGene DosageGene DuplicationGene FusionGynecomastiaHumansInfertility, MaleMaleMetabolism, Inborn ErrorsAromataseCYP19A1 protein, human

Identifiers

PMID24064691
PMCPMC5399493
OpenAlexW2114676909

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.