Evidence map›Paper›PMID 24062572›Full record

ArticleRNA (New York, N.Y.)2013

Bicaudal-C spatially controls translation of vertebrate maternal mRNAs.

Yan Zhang, Amy Cooke, Sookhee Park, Colin N Dewey, Marvin Wickens, Michael D Sheets

Open access · bronzeAbstract read
In one paragraph

Article in RNA (New York, N.Y.), 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 23 papers.

0numbers the graph read from it
0cells of the map it votes in
23citing papers in PubMed
1.0field-weighted citation impact, top 23% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

23 citing papers in PubMed, 30 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. mRNA (New York, N.Y.) · 2025
    Article
  7. Article
  8. Article
  9. Review
  10. Bicaudal-C Post-transcriptional regulator of cell fates and functions.Frontiers in cell and developmental biology · 2022
    Review
  11. Article
  12. Article
  13. Molecular and cellular basis of left-right asymmetry in vertebrates.Proceedings of the Japan Academy. Series B, Physical and biological sciences · 2020
    Review
  14. Article
  15. Assaying NanoLuc Luciferase Activity from mRNA-Injected Xenopus Embryos.Methods in molecular biology (Clifton, N.J.) · 2019
    Article
  16. Article
  17. Article
  18. Review
  19. Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

Yan Zhang
Amy Cooke
Sookhee Park
Colin N Dewey
Marvin Wickens
Michael D Sheets
University of Wisconsin–Madison · US

Funding

GRADUATE TRAINING IN MOLECULAR BIOSCIENCEST32GM007215 · NIGMS · UNIVERSITY OF WISCONSIN-MADISON · PI HULL, CHRISTINA M · 1985 to 2018
$22.5M
FUNCTION OF POLY(A) AND 3'UTRSR01GM050942 · NIGMS · UNIVERSITY OF WISCONSIN-MADISON · PI WICKENS, MARVIN P. · 1994 to 2020
$8.3M
Cleavage, polyadenylation, and transport of mRNAR37GM031892 · NIGMS · UNIVERSITY OF WISCONSIN-MADISON · PI WICKENS, MARVIN P. · 2003 to 2012
$3.5M
Computational methods for the analysis of RNA-Seq dataR01HG005232 · NHGRI · UNIVERSITY OF WISCONSIN-MADISON · PI DEWEY, COLIN NOEL · 2010 to 2012
$825k
CLEAVAGE, POLYADENYLATION, AND TRANSPORT OF MRNAR01GM031892 · NIGMS · UNIVERSITY OF WISCONSIN MADISON · PI WICKENS, MARVIN P. · 1985 to 2000
$278k
NHGRI NIH HHS HG005232NHGRI NIH HHS R01 HG005232NIGMS NIH HHS GM31892NIGMS NIH HHS GM50942NIGMS NIH HHS R01 GM031892NIGMS NIH HHS R01 GM050942NIGMS NIH HHS R37 GM031892NIGMS NIH HHS T32 GM007215NIGMS NIH HHS T32GM07215
6 · The paper itself

Abstract

The Xenopus Cripto-1 protein is confined to the cells of the animal hemisphere during early embryogenesis where it regulates the formation of anterior structures. Cripto-1 protein accumulates only in animal cells because cripto-1 mRNA in cells of the vegetal hemisphere is translationally repressed. Here, we show that the RNA binding protein, Bicaudal-C (Bic-C), functioned directly in this vegetal cell-specific repression. While Bic-C protein is normally confined to vegetal cells, ectopic expression of Bic-C in animal cells repressed a cripto-1 mRNA reporter and associated with endogenous cripto-1 mRNA. Repression by Bic-C required its N-terminal domain, comprised of multiple KH motifs, for specific binding to relevant control elements within the cripto-1 mRNA and a functionally separable C-terminal translation repression domain. Bic-C-mediated repression required the 5' CAP and translation initiation factors, but not a poly(A) tail or the conserved SAM domain within Bic-C. Bic-C-directed immunoprecipitation followed by deep sequencing of associated mRNAs identified multiple Bic-C-regulated mRNA targets, including cripto-1 mRNA, providing new insights and tools for understanding the role of Bic-C in vertebrate development.

Indexed as

3' Untranslated RegionsAnimalsBase SequenceGPI-Linked ProteinsIntercellular Signaling Peptides and ProteinsMembrane ProteinsProtein BiosynthesisProtein Structure, TertiaryRNA-Binding ProteinsRNA, Messenger, StoredSequence Analysis, RNAXenopus laevisXenopus Proteins3' Untranslated RegionsBICC1 protein, XenopusGPI-Linked ProteinsIntercellular Signaling Peptides and ProteinsMembrane ProteinsRNA-Binding ProteinsRNA, Messenger, Storedtdgf1.3 protein, XenopusXenopus ProteinsBicaudal-Cmaternal mRNAstranslationXenopus

Identifiers

PMID24062572
PMCPMC3851724
OpenAlexW2107818820

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.