Evidence map›Paper›PMID 24058473›Full record

ArticlePloS one2013

Efficient TALEN construction for Bombyx mori gene targeting.

Yoko Takasu, Suresh Sajwan, Takaaki Daimon, Mizuko Osanai-Futahashi, Keiro Uchino, Hideki Sezutsu, Toshiki Tamura, Michal Zurovec

Erratum issuedOpen access · goldAbstract read
In one paragraph

Article in PloS one, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 29 papers.

0numbers the graph read from it
0cells of the map it votes in
29citing papers in PubMed
4.3field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

29 citing papers in PubMed, 81 citations in OpenAlex.

  1. Review
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  12. CRISPR-Cas9 Mediated Genome Editing inMethods and protocols · 2018
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  17. Review
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  19. Review
  20. Knockout silkworms reveal a dispensable role for juvenile hormones in holometabolous life cycle.Proceedings of the National Academy of Sciences of the United States of America · 2015
    Article
4 · The record

Corrections and comments

  • Erratum issued
5 · Who and what money

Authors and funding

8 authors at 2 institutions in 2 countries.

Yoko TakasuNational Institute of Agrobiological Sciences, Tsukuba, Japan.
Suresh Sajwan
Takaaki Daimon
Mizuko Osanai-Futahashi
Keiro Uchino
Hideki Sezutsu
Toshiki Tamura
Michal Zurovec
Institute of Agrobiological Sciences · JPCzech Academy of Sciences, Biology Centre · CZ

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Engineered nucleases are artificial enzymes able to introduce double stranded breaks at desired genomic locations. The double stranded breaks start the error-prone repair process of non-homologous end-joining (NHEJ), which eventually leads to the induction of mutations at target sites. We showed earlier that ZFNs and TALENs are able to induce NHEJ mutations in the B. mori genome. In order to optimize our mutagenesis protocol, we modified one of the reported truncated TALEN scaffolds and optimized it for use in the B. mori embryo. We also established a novel B. mori somatic cell assay suitable for the preselection of highly efficient TALENs directly in the B. mori model system. We compared the efficiency of several TALEN pairs based on three different frameworks using the BmBLOS2 gene. The new active TALENs show one order of magnitude higher efficiency than those we used previously. We confirmed the utility of our improved protocol by mutagenesis of the autosomal gene, red egg (Bm-re) and showed that it allows obtaining homozygous mutants in G1. Our procedure minimizes the chance of failure in B. mori gene targeting experiments.

Indexed as

Genome, InsectAnimalsBase SequenceBombyxDNA End-Joining RepairEmbryo, NonmammalianEndonucleasesGene TargetingGenetic EngineeringHomozygoteLarvaMolecular Sequence DataMutagenesis, InsertionalPlant ProteinsTranscription, GeneticEndonucleasesPlant Proteins

Identifiers

PMID24058473
PMCPMC3776831
OpenAlexW2004542444

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.