Evidence map›Paper›PMID 24056104›Full record

ArticleJournal of bacteriology2013

Identification of SPOR domain amino acids important for septal localization, peptidoglycan binding, and a disulfide bond in the cell division protein FtsN.

Tammi R Duncan, Atsushi Yahashiri, S J Ryan Arends, David L Popham, David S Weiss

Open access · bronzeAbstract read
In one paragraph

Article in Journal of bacteriology, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed
2.3field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed, 25 citations in OpenAlex.

  1. Article
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  9. Disruption of divisome assembly rescued by FtsN-FtsA interaction inProceedings of the National Academy of Sciences of the United States of America · 2018
    Article
  10. Review
  11. Article
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  14. Bacterial SPOR domains are recruited to septal peptidoglycan by binding to glycan strands that lack stem peptides.Proceedings of the National Academy of Sciences of the United States of America · 2015
    Article
  15. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 1 country.

Tammi R DuncanDepartment of Microbiology, Carver College of Medicine, The University of Iowa, Iowa City, Iowa, USA.
Atsushi Yahashiri
S J Ryan Arends
David L Popham
David S Weiss
University of Iowa · USVirginia Tech · US

Funding

Discovery and characterization of new bacterial cell division genesR01GM083975 · NIGMS · UNIVERSITY OF IOWA · PI WEISS, DAVID S · 2009 to 2012
$1.3M
NIGMS NIH HHS GM083975NIGMS NIH HHS R01 GM083975
6 · The paper itself

Abstract

SPOR domains are about 75 amino acids long and probably bind septal peptidoglycan during cell division. We mutagenized 33 amino acids with surface-exposed side chains in the SPOR domain from an Escherichia coli cell division protein named FtsN. The mutant SPOR domains were fused to Tat-targeted green fluorescent protein ((TT)GFP) and tested for septal localization in live E. coli cells. Lesions at the following 5 residues reduced septal localization by a factor of 3 or more: Q251, S254, W283, R285, and I313. All of these residues map to a β-sheet in the published solution structure of FtsN(SPOR). Three of the mutant proteins (Q251E, S254E, and R285A mutants) were purified and found to be defective in binding to peptidoglycan sacculi in a cosedimentation assay. These results match closely with results from a previous study of the SPOR domain from DamX, even though these two SPOR domains share <20% amino acid identity. Taken together, these findings support the proposal that SPOR domains localize by binding to septal peptidoglycan and imply that the binding site is associated with the β-sheet. We also show that FtsN(SPOR) contains a disulfide bond between β-sheet residues C252 and C312. The disulfide bond contributes to protein stability, cell division, and peptidoglycan binding.

Indexed as

Amino Acid SequenceCell DivisionEscherichia coliEscherichia coli ProteinsGene Expression Regulation, BacterialMembrane ProteinsModels, MolecularMolecular Sequence DataMutationPeptidoglycanProtein BindingProtein ConformationProtein Structure, TertiaryProtein TransportEscherichia coli ProteinsFtsN protein, E coliMembrane ProteinsPeptidoglycan

Identifiers

PMID24056104
PMCPMC3837948
OpenAlexW2089091985

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.