Evidence map›Paper›PMID 24055706›Full record

ArticleBiochemical and biophysical research communications2013

Asymmetric packaging of polymerases within vesicular stomatitis virus.

Jeffery Hodges, Xiaolin Tang, Michael B Landesman, John B Ruedas, Anil Ghimire, Manasa V Gudheti, Jacques Perrault, Erik M Jorgensen, Jordan M Gerton, Saveez Saffarian

Open access · hybridAbstract read
In one paragraph

Article in Biochemical and biophysical research communications, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
2.2field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 18 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Review
  5. Article
  6. Article
  7. Article
  8. Superresolution imaging of viral protein trafficking.Medical microbiology and immunology · 2015
    Review
  9. Article
  10. Article
  11. Review
  12. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 3 institutions in 1 country.

Jeffery HodgesDept. of Physics and Astronomy, University of Utah, United States; Center for Cell and Genome Science, University of Utah, United States.
Xiaolin Tang
Michael B Landesman
John B Ruedas
Anil Ghimire
Manasa V Gudheti
Jacques Perrault
Erik M Jorgensen
Jordan M Gerton
Saveez Saffarian
University of Utah · USSan Diego State University · USHoward Hughes Medical Institute · US

Funding

SYNAPTIC FUNCTION IN THE NEMATODE C. ELEGANSR01NS034307 · NINDS · UNIVERSITY OF UTAH · PI JORGENSEN, ERIK M · 1995 to 2024
$5.8M
Howard Hughes Medical InstituteNINDS NIH HHS R01 NS034307
6 · The paper itself

Abstract

Vesicular stomatitis virus (VSV) is a prototypic negative sense single-stranded RNA virus. The bullet-shape appearance of the virion results from tightly wound helical turns of the nucleoprotein encapsidated RNA template (N-RNA) around a central cavity. Transcription and replication require polymerase complexes, which include a catalytic subunit L and a template-binding subunit P. L and P are inferred to be in the cavity, however lacking direct observation, their exact position has remained unclear. Using super-resolution fluorescence imaging and atomic force microscopy (AFM) on single VSV virions, we show that L and P are packaged asymmetrically towards the blunt end of the virus. The number of L and P proteins varies between individual virions and they occupy 57 ± 12 nm of the 150 nm central cavity of the virus. Our finding positions the polymerases at the opposite end of the genome with respect to the only transcriptional promoter.

Indexed as

DNA-Directed RNA PolymerasesMicroscopy, Atomic ForceMicroscopy, FluorescenceRNA, ViralVesicular stomatitis Indiana virusViral ProteinsVirus AssemblyDNA-Directed RNA PolymerasesL polymerase protein, Vesicular stomatitis-Indiana virusRNA, ViralViral ProteinsAFML proteinPALMPolymeraseP proteinRdRPSTORMViral replicationVSV

Identifiers

PMID24055706
PMCPMC4350925
OpenAlexW2135759872

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.