Evidence map›Paper›PMID 24055379›Full record

ArticleJournal of molecular biology2014

Mechanism of assembly of the non-covalent spectrin tetramerization domain from intrinsically disordered partners.

Stephanie A Hill, Lee Gyan Kwa, Sarah L Shammas, Jennifer C Lee, Jane Clarke

Abstract read
In one paragraph

Article in Journal of molecular biology, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed.

  1. Article
  2. Article
  3. De Novo and Dominantly Inherited SPTAN1 Mutations Cause Spastic Paraplegia and Cerebellar Ataxia.Movement disorders : official journal of the Movement Disorder Society · 2022
    Article
  4. Article
  5. Cotranslational folding cooperativity of contiguous domains of α-spectrin.Proceedings of the National Academy of Sciences of the United States of America · 2020
    Article
  6. Article
  7. Review
  8. Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Affinity of IDPs to their targets is modulated by ion-specific changes in kinetics and residual structure.Proceedings of the National Academy of Sciences of the United States of America · 2017
    Article
  14. Review
  15. Article
  16. Article
  17. Protein folding in the cell, from atom to organism.FASEB journal : official publication of the Federation of American Societies for Experimental Biology · 2014
    Article
  18. Interplay between partner and ligand facilitates the folding and binding of an intrinsically disordered protein.Proceedings of the National Academy of Sciences of the United States of America · 2014
    Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

5 authors.

Stephanie A HillUniversity of Cambridge Chemical Laboratory, Lensfield Road, Cambridge CB2 1EW, UK; Laboratory of Molecular Biophysics, Biochemistry and Biophysics Center, National Heart, Lung, and Blood Institute, National Institutes of Health, Bethesda, MD 20892, USA.
Lee Gyan KwaUniversity of Cambridge Chemical Laboratory, Lensfield Road, Cambridge CB2 1EW, UK.
Sarah L ShammasUniversity of Cambridge Chemical Laboratory, Lensfield Road, Cambridge CB2 1EW, UK.
Jennifer C LeeLaboratory of Molecular Biophysics, Biochemistry and Biophysics Center, National Heart, Lung, and Blood Institute, National Institutes of Health, Bethesda, MD 20892, USA.
Jane ClarkeUniversity of Cambridge Chemical Laboratory, Lensfield Road, Cambridge CB2 1EW, UK. Electronic address: jc162@cam.ac.uk.

Funding

Protein Misfolding and AggregationZ01HL001055 · NHLBI · NATIONAL HEART, LUNG, AND BLOOD INSTITUTE · PI LEE, JENNIFER · 2007 to 2008
$2.8M
Intramural NIH HHS Z01 HL001055Wellcome Trust 095195
6 · The paper itself

Abstract

Interdomain interactions of spectrin are critical for maintenance of the erythrocyte cytoskeleton. In particular, "head-to-head" dimerization occurs when the intrinsically disordered C-terminal tail of β-spectrin binds the N-terminal tail of α-spectrin, folding to form the "spectrin tetramer domain". This non-covalent three-helix bundle domain is homologous in structure and sequence to previously studied spectrin domains. We find that this tetramer domain is surprisingly kinetically stable. Using a protein engineering Φ-value analysis to probe the mechanism of formation of this tetramer domain, we infer that the domain folds by the docking of the intrinsically disordered β-spectrin tail onto the more structured α-spectrin tail.

Indexed as

Protein FoldingProtein MultimerizationKineticsProtein Interaction Domains and MotifsProtein StabilitySpectrinSpectrinGdmClguanidinium chlorideIDPintrinsically disordered proteinisothermal titration calorimetryITCNational Institutes of Healthnatively unfolded proteinNIHprotein engineeringprotein foldingΦ-value analysis

Identifiers

PMID24055379
PMCPMC9082959

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.