Evidence map›Paper›PMID 24052560›Full record

ArticleAnnals of botany2013

Dissimilarity of contemporary and historical gene flow in a wild carrot (Daucus carota) metapopulation under contrasting levels of human disturbance: implications for risk assessment and management of transgene introgression.

Jun Rong, Shuhua Xu, Patrick G Meirmans, Klaas Vrieling

Open access · bronzeAbstract read
In one paragraph

Article in Annals of botany, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
2.3field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

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3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 12 citations in OpenAlex.

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4 · The record

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5 · Who and what money

Authors and funding

4 authors at 4 institutions in 2 countries.

Jun RongPlant Ecology and Phytochemistry, Institute of Biology Leiden, Leiden University, PO Box 9505, 2300 RA Leiden, The Netherlands.
Shuhua Xu
Patrick G Meirmans
Klaas Vrieling
Chinese Academy of Sciences · CNLeiden University · NLNanchang University · CNUniversity of Amsterdam · NL

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

BACKGROUND AND

aimsTransgene introgression from crops into wild relatives may increase the resistance of wild plants to herbicides, insects, etc. The chance of transgene introgression depends not only on the rate of hybridization and the establishment of hybrids in local wild populations, but also on the metapopulation dynamics of the wild relative. The aim of the study was to estimate gene flow in a metapopulation for assessing and managing the risks of transgene introgression.

methodsWild carrots (Daucus carota) were sampled from 12 patches in a metapopulation. Eleven microsatellites were used to genotype wild carrots. Genetic structure was estimated based on the FST statistic. Contemporary (over the last several generations) and historical (over many generations) gene flow was estimated with assignment and coalescent methods, respectively. KEY

resultsThe genetic structure in the wild carrot metapopulation was moderate (FST = 0·082) and most of the genetic variation resided within patches. A pattern of isolation by distance was detected, suggesting that most of the gene flow occurred between neighbouring patches (≤1 km). The mean contemporary gene flow was 5 times higher than the historical estimate, and the correlation between them was very low. Moreover, the contemporary gene flow in roadsides was twice that in a nature reserve, and the correlation between contemporary and historical estimates was much higher in the nature reserve. Mowing of roadsides may contribute to the increase in contemporary gene flow. Simulations demonstrated that the higher contemporary gene flow could accelerate the process of transgene introgression in the metapopulation.

conclusionsHuman disturbance such as mowing may alter gene flow patterns in wild populations, affecting the metapopulation dynamics of wild plants and the processes of transgene introgression in the metapopulation. The risk assessment and management of transgene introgression and the control of weeds need to take metapopulation dynamics into consideration.

Indexed as

InbreedingComputer SimulationDaucus carotaGene FlowGenetics, PopulationGenetic VariationGeographyHumansMicrosatellite RepeatsModels, GeneticNetherlandsPlants, Genetically ModifiedRisk AssessmentTransgenesDaucus carotagene flowgenetically modified cropsgenetic structureGMmetapopulation dynamicsmigration ratetransgene introgressionweed controlwild carrot

Identifiers

PMID24052560
PMCPMC3806537
OpenAlexW2147970188

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.