Evidence map›Paper›PMID 24051002›Full record

ArticleJournal of hazardous materials2013

A novel P450-initiated biphasic process for sustainable biodegradation of benzo[a]pyrene in soil under nutrient-sufficient conditions by the white rot fungus Phanerochaete chrysosporium.

Sukanta S Bhattacharya, Khajamohiddin Syed, Jodi Shann, Jagjit S Yadav

Open access · greenAbstract read
In one paragraph

Article in Journal of hazardous materials, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
2.1field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 57 citations in OpenAlex.

  1. Review
  2. Article
  3. Review
  4. Article
  5. Article
  6. Mycoremediation: Expunging environmental pollutants.Biotechnology reports (Amsterdam, Netherlands) · 2020
    Review
  7. Genome-wide analysis of cytochrome P450s ofFungal biology and biotechnology · 2018
    Article
  8. Diverse Metabolic Capacities of Fungi for Bioremediation.Indian journal of microbiology · 2016
    Review
  9. Biodegradation of Mixed PAHs by PAH-Degrading Endophytic Bacteria.International journal of environmental research and public health · 2016
    Article
  10. Article
  11. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Sukanta S BhattacharyaDepartment of Environmental Health, University of Cincinnati, Cincinnati, OH, USA.
Khajamohiddin Syed
Jodi Shann
Jagjit S Yadav
University of Cincinnati · US

Funding

FUNGAL P450 SYSTEMS IN BIODEGRADATION OF HIGHER PAHS-R01ES15543-01R01ES015543 · NIEHS · UNIVERSITY OF CINCINNATI · PI YADAV, JAGJIT S · 2008 to 2011
$1.1M
XENOBIOTIC-OXIDIZING P450 SYSTEM IN A WHITE ROT FUNGUSR01ES010210 · NIEHS · UNIVERSITY OF CINCINNATI · PI YADAV, JAGJIT S · 2001 to 2003
$689k
NIEHS NIH HHS R01 ES010210NIEHS NIH HHS R01 ES015543NIEHS NIH HHS R01ES015543NIEHS NIH HHS R01ES10210
6 · The paper itself

Abstract

High molecular weight polycyclic aromatic hydrocarbons (HMW-PAHs) such as benzo[a]pyrene (BaP) are resistant to biodegradation in soil. Conventionally, white rot fungus Phanerochaete chrysosporium has been investigated for HMW-PAH degradation in soil primarily using nutrient-deficient (ligninolytic) conditions, albeit with limited and non-sustainable biodegradation outcomes. In this study, we report development of an alternative novel biphasic process initiated under nutrient-sufficient (non-ligninolytic) culture conditions, by employing an advanced experimental design strategy. During the initial nutrient-sufficient non-ligninolytic phase (16 days), the process showed upregulation (3.6- and 22.3-fold, respectively) of two key PAH-oxidizing P450 monooxygenases pc2 (CYP63A2) and pah4 (CYP5136A3) and formation of typical P450-hydroxylated metabolite. This along with abrogation (84.9%) of BaP degradation activity in response to a P450-specific inhibitor implied key role of these monooxygenases. The subsequent phase triggered on continued incubation (to 25 days) switched the process from non-ligninolytic to ligninolytic resulting in a significantly higher net degradation (91.6% as against 67.4% in the control nutrient-limited set) of BaP with concomitant de novo ligninolytic enzyme expression making it a biphasic process yielding improved sustainable bioremediation of PAH-contaminated soil. To our knowledge this is the first report on development of such biphasic process for bioremediation application of a white rot fungus.

Indexed as

Benzo(a)pyreneBiodegradation, EnvironmentalCytochrome P-450 Enzyme SystemPhanerochaeteSoil PollutantsBenzo(a)pyreneCytochrome P-450 Enzyme SystemSoil PollutantsGenetic algorithmNon-ligninolyticP450PAH biodegradationResponse surface methodologyTranscript analysis in soil

Identifiers

PMID24051002
PMCPMC3871869
OpenAlexW2020372613

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.