Evidence map›Paper›PMID 24050210›Full record

ArticleEmerging infectious diseases2013

Genetic recombination and Cryptosporidium hominis virulent subtype IbA10G2.

Na Li, Lihua Xiao, Vitaliano A Cama, Ynes Ortega, Robert H Gilman, Meijin Guo, Yaoyu Feng

Open access · diamondAbstract read
In one paragraph

Article in Emerging infectious diseases, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 42 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
42citing papers in PubMed, 1 pooled it
4.2field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

42 citing papers in PubMed, 1 synthesis or guideline pooled it, 67 citations in OpenAlex.

  1. Prevalence of human cryptosporidiosis in the Americas: systematic review and meta-analysis.Revista do Instituto de Medicina Tropical de Sao Paulo · 2022
    Pooled it
  2. Article
  3. Article
  4. Article
  5. Review
  6. Evaluation of Next-Generation Sequencing Applied toPathogens (Basel, Switzerland) · 2022
    Article
  7. Article
  8. Cryptosporidiosis outbreak in Amazonia, French Guiana, 2018.PLoS neglected tropical diseases · 2022
    Article
  9. Article
  10. Challenges forGenes · 2021
    Review
  11. Review
  12. Article
  13. SubtypingMicroorganisms · 2020
    Article
  14. Article
  15. Article
  16. Frontiers in veterinary science · 2020
    Review
  17. Article
  18. Article
  19. Review
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 2 countries.

Na Li
Lihua Xiao
Vitaliano A Cama
Ynes Ortega
Robert H Gilman
Meijin Guo
Yaoyu Feng
East China University of Science and Technology · CNGriffin Hospital · USJohns Hopkins University · US

Funding

Serological &Molecular Techniques-- Epidemiology of Cyclospora cayetanensisP01AI051976 · NIAID · UNIVERSIDAD PERUANA CAYETANO HEREDIA · PI GARCIA, HECTOR HUGO · 2002 to 2006
$3.3M
Transmission Dynamics of Cryptosporidium spR21AI059661 · NIAID · JOHNS HOPKINS UNIVERSITY · PI GILMAN, ROBERT H · 2004 to 2005
$348k
NIAID NIH HHS 5P01AI051976NIAID NIH HHS 5R21AI059661NIAID NIH HHS P01 AI051976NIAID NIH HHS R21 AI059661
6 · The paper itself

Abstract

Little is known about the emergence and spread of virulent subtypes of Cryptosporidium hominis, the predominant species responsible for human cryptosporidiosis. We conducted sequence analyses of 32 genetic loci of 53 C. hominis specimens isolated from a longitudinally followed cohort of children living in a small community. We identified by linkage disequilibrium and recombination analyses only limited genetic recombination, which occurred exclusively within the 60-kDa glycoprotein gene subtype IbA10G2, a predominant subtype for outbreaks in industrialized nations and a virulent subtype in the study community. Intensive transmission of virulent subtype IbA10G2 in the study area might have resulted in genetic recombination with other subtypes. Moreover, we identified selection for IbA10G2 at a 129-kb region around the 60-kDa glycoprotein gene in chromosome 6. These findings improve our understanding of the origin and evolution of C. hominis subtypes and the spread of virulent subtypes.

Indexed as

ChildCryptosporidiosisCryptosporidiumGenes, ProtozoanGenetic LociGlycoproteinsHaplotypesHumansLinkage DisequilibriumLongitudinal StudiesMultilocus Sequence TypingPolymorphism, Restriction Fragment LengthProtozoan ProteinsRecombination, GeneticVirulenceGlycoproteinsProtozoan ProteinscryptosporidiosisCryptosporidium hominisgenetic recombinationmolecular epidemiologyparasitespopulation geneticssubtypesubtype IbA10G2virulence

Identifiers

PMID24050210
PMCPMC3810731
OpenAlexW2012877817

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.