Evidence map›Paper›PMID 24049186›Full record

ArticleJournal of virology2013

Bromo- and extraterminal domain chromatin regulators serve as cofactors for murine leukemia virus integration.

Saumya Shree Gupta, Tobias Maetzig, Goedele N Maertens, Azar Sharif, Michael Rothe, Magdalena Weidner-Glunde, Melanie Galla, Axel Schambach, Peter Cherepanov, Thomas F Schulz

Erratum issuedOpen access · bronzeAbstract read
In one paragraph

Article in Journal of virology, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 92 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
92citing papers in PubMed, 1 pooled it
8.8field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

92 citing papers in PubMed, 1 synthesis or guideline pooled it, 139 citations in OpenAlex.

  1. Pooled it
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  14. Structure and function of retroviral integrase.Nature reviews. Microbiology · 2022
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32 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

10 authors at 4 institutions in 3 countries.

Saumya Shree GuptaInstitute of Virology, Hannover Medical School, Hannover, Germany.
Tobias Maetzig
Goedele N Maertens
Azar Sharif
Michael Rothe
Magdalena Weidner-Glunde
Melanie Galla
Axel Schambach
Peter Cherepanov
Thomas F Schulz
Medizinische Hochschule Hannover · DEImperial College London · GBBoston Children's Hospital · USCancer Research UK · GB

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Retroviral integrase (IN) proteins catalyze the permanent integration of proviral genomes into host DNA with the help of cellular cofactors. Lens epithelium-derived growth factor (LEDGF) is a cofactor for lentiviruses, including human immunodeficiency virus type 1 (HIV-1), and targets lentiviral integration toward active transcription units in the host genome. In contrast to lentiviruses, murine leukemia virus (MLV), a gammaretrovirus, tends to integrate near transcription start sites. Here, we show that the bromodomain and extraterminal domain (BET) proteins BRD2, BRD3, and BRD4 interact with gammaretroviral INs and stimulate the catalytic activity of MLV IN in vitro. We mapped the interaction site to a characteristic structural feature within the BET protein extraterminal (ET) domain and to three amino acids in MLV IN. The ET domains of different BET proteins stimulate MLV integration in vitro and, in the case of BRD2, also in vivo. Furthermore, two small-molecule BET inhibitors, JQ1 and I-BET, decrease MLV integration and shift it away from transcription start sites. Our data suggest that BET proteins might act as chromatin-bound acceptors for the MLV preintegration complex. These results could pave a way to redirecting MLV DNA integration as a basis for creating safer retroviral vectors.

Indexed as

Virus IntegrationAmino Acid MotifsAnimalsBromodomain Containing ProteinsCell Cycle ProteinsCell LineChromatinHEK293 CellsHumansIntegrasesLeukemia Virus, MurineMiceNuclear ProteinsProtein BindingProtein Serine-Threonine KinasesProtein Structure, TertiaryBRD2 protein, humanBRD3 protein, humanBRD4 protein, humanBromodomain Containing ProteinsCell Cycle ProteinsChromatinIntegrasesNuclear ProteinsProtein Serine-Threonine KinasesRNA-Binding ProteinsTranscription FactorsViral Proteins

Identifiers

PMID24049186
PMCPMC3838128
OpenAlexW2127867655

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.