Evidence map›Paper›PMID 24048849›Full record

ArticleThe Journal of neuroscience : the official journal of the Society for Neuroscience2013

Transgene expression in target-defined neuron populations mediated by retrograde infection with adeno-associated viral vectors.

Markus Rothermel, Daniela Brunert, Christine Zabawa, Marta Díaz-Quesada, Matt Wachowiak

Open access · bronzeAbstract read
In one paragraph

Article in The Journal of neuroscience : the official journal of the Society for Neuroscience, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 76 papers.

0numbers the graph read from it
0cells of the map it votes in
76citing papers in PubMed
5.4field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

76 citing papers in PubMed, 120 citations in OpenAlex.

  1. Article
  2. Article
  3. Rostral Ventromedial Medulla (RVM) Projects to the Lateral Hypothalamic Area (LHA) to Drive Aversion and Anxiety.The Journal of neuroscience : the official journal of the Society for Neuroscience · 2026
    Article
  4. Article
  5. Review
  6. Article
  7. Article
  8. Article
  9. Review
  10. Article
  11. Review
  12. Review
  13. Modulating the Excitability of Olfactory Output Neurons Affects Whole-Body Metabolism.The Journal of neuroscience : the official journal of the Society for Neuroscience · 2022
    Article
  14. Article
  15. Article
  16. Article
  17. Review
  18. Review
  19. Generation and Characterization of a Cell Type-Specific, Inducible Cre-Driver Line to Study Olfactory Processing.The Journal of neuroscience : the official journal of the Society for Neuroscience · 2021
    Article
  20. Review

16 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Markus RothermelBrain Institute and Department of Neurobiology and Anatomy, University of Utah, Salt Lake City, Utah 84112.
Daniela Brunert
Christine Zabawa
Marta Díaz-Quesada
Matt Wachowiak
University of Utah · US

Funding

Dynamics of Glomerular Coding in the Olfactory BulbR01DC006441 · NIDCD · UNIVERSITY OF UTAH · PI WACHOWIAK, DALE M · 2004 to 2018
$4.9M
Target-Defined Parallel Pathways in the Olfactory SystemR01DC013076 · NIDCD · UNIVERSITY OF UTAH · PI WACHOWIAK, DALE M · 2013 to 2017
$1.6M
NIDCD NIH HHS DC06441NIDCD NIH HHS R01 DC006441NIDCD NIH HHS R01 DC013076
6 · The paper itself

Abstract

Tools enabling the manipulation of well defined neuronal subpopulations are critical for probing complex neuronal networks. Cre recombinase (Cre) mouse driver lines in combination with the Cre-dependent expression of proteins using viral vectors--in particular, recombinant adeno-associated viral vectors (rAAVs)--have emerged as a widely used platform for achieving transgene expression in specified neural populations. However, the ability of rAAVs to further specify neuronal subsets on the basis of their anatomical connectivity has been reported as limited or inconsistent. Here, we systematically tested a variety of widely used neurotropic rAAVs for their ability to mediate retrograde gene transduction in the mouse brain. We tested pseudotyped rAAVs of several common serotypes (rAAV 2/1, 2/5, and 2/9) as well as constructs both with and without Cre-dependent expression switches. Many of the rAAVs tested--in particular, though not exclusively, Cre-dependent vectors--showed a robust capacity for retrograde infection and transgene expression. Retrograde expression was successful over distances as large as 6 mm and in multiple neuron types, including olfactory projection neurons, neocortical pyramidal cells projecting to distinct targets, and corticofugal and modulatory projection neurons. Retrograde infection using transgenes such as ChR2 allowed for optical control or optically assisted electrophysiological identification of neurons defined genetically as well as by their projection target. These results establish a widely accessible tool for achieving combinatorial specificity and stable, long-term transgene expression to isolate precisely defined neuron populations in the intact animal.

Indexed as

Action PotentialsAnimalsChannelrhodopsinsCholecystokininDependovirusFemaleGene Expression RegulationGenetic VectorsGlutamate DecarboxylaseIntegrasesLuminescent ProteinsMaleMiceMice, TransgenicNeural PathwaysNeuronsChannelrhodopsinsCholecystokininCre recombinaseGlutamate Decarboxylaseglutamate decarboxylase 2IntegrasesLuminescent ProteinsSerotonin Plasma Membrane Transport ProteinsSlc6a4 protein, mouse

Identifiers

PMID24048849
PMCPMC3776063
OpenAlexW2057208767

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.