Evidence map›Paper›PMID 24048523›Full record

ArticleScience translational medicine2013

MHC class I-associated phosphopeptides are the targets of memory-like immunity in leukemia.

Mark Cobbold, Hugo De La Peña, Andrew Norris, Joy M Polefrone, Jie Qian, Ann Michelle English, Kara L Cummings, Sarah Penny, James E Turner, Jennifer Cottine and 12 more

Abstract read
In one paragraph

Article in Science translational medicine, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 132 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
132citing papers in PubMed, 1 pooled it
6.6field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

132 citing papers in PubMed, 1 synthesis or guideline pooled it, 202 citations in OpenAlex.

  1. Pooled it
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  17. Tumor neoantigens and tumor immunotherapies.Aging medicine (Milton (N.S.W)) · 2024
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72 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

22 authors at 5 institutions in 2 countries.

Mark CobboldCarter Immunology Center and Department of Microbiology, Immunology and Cancer Biology, University of Virginia, Charlottesville, VA 22908, USA.
Hugo De La Peña
Andrew Norris
Joy M Polefrone
Jie Qian
Ann Michelle English
Kara L Cummings
Sarah Penny
James E Turner
Jennifer Cottine
Jennifer G Abelin
Stacy A Malaker
Angela L Zarling
Hsing-Wen Huang
Oliver Goodyear
Sylvie D Freeman
Jeffrey Shabanowitz
Guy Pratt
Charles Craddock
Michael E Williams
Donald F Hunt
Victor H Engelhard
University of Virginia · USImmune Regulation (United Kingdom) · GBCarter Center · USQueen Elizabeth Hospital Birmingham · GBUniversity of Birmingham · GB

Funding

Women's Oncology Program - WONP30CA044579 · NCI · UNIVERSITY OF VIRGINIA CHARLOTTESVILLE · PI Thomas P. Loughran · 1987 to 2026
$72.1M
PROCESSED ANTIGEN CHARACTERIZATION BY MASS SPECTROMETRYR37AI033993 · NIAID · UNIVERSITY OF VIRGINIA CHARLOTTESVILLE · PI HUNT, DONALD F · 1999 to 2008
$5.6M
PROCESSED ANTIGEN CHARACTERIZATION BY MASS SPECTROMETRYR01AI033993 · NIAID · UNIVERSITY OF VIRGINIA CHARLOTTESVILLE · PI HUNT, DONALD F · 1994 to 2017
$4.9M
Antigenic Determinants on HLA-B7 and -A2R01CA134060 · NCI · UNIVERSITY OF VIRGINIA · PI ENGELHARD, VICTOR H · 2008 to 2012
$2.4M
ANTIGENIC DETERMINANTS ON HLA-B7 AND -A2R01AI020963 · NIAID · UNIVERSITY OF VIRGINIA CHARLOTTESVILLE · PI ENGELHARD, VICTOR H · 1985 to 2006
$1.8M
ANTIGENIC DETERMINENTS ON HLA-B7 AND HLA-A2R37AI020963 · NIAID · UNIVERSITY OF VIRGINIA CHARLOTTESVILLE · PI ENGELHARD, VICTOR H. · 1994 to 2001
$653k
Medical Research Council G108/574NCI NIH HHS CA134060NCI NIH HHS P30 CA044579NCI NIH HHS P30 CA45579NCI NIH HHS R01 CA134060NIAID NIH HHS AI20963NIAID NIH HHS AI33993NIAID NIH HHS R01 AI020963NIAID NIH HHS R01 AI033993NIAID NIH HHS R37 AI020963NIAID NIH HHS R37 AI033993
6 · The paper itself

Abstract

Deregulation of signaling pathways is a hallmark of malignant transformation. Signaling-associated phosphoproteins can be degraded to generate cancer-specific phosphopeptides that are presented by major histocompatibility complex (MHC) class I and II molecules and recognized by T cells; however, the contribution of these phosphoprotein-specific T cells to immune surveillance is unclear. We identified 95 phosphopeptides presented on the surface of primary hematological tumors and normal tissues, including 61 that were tumor-specific. Phosphopeptides were more prevalent on more aggressive and malignant samples. CD8(+) T cell lines specific for these phosphopeptides recognized and killed both leukemia cell lines and human leukocyte antigen-matched primary leukemia cells ex vivo. Notably, healthy individuals showed robust CD8(+) T cell responses against many of these phosphopeptides within the circulating memory compartment. This immunity was significantly reduced or absent in some leukemia patients. This reduction correlated with clinical outcome; however, immunity was restored after allogeneic stem cell transplantation. These results suggest that phosphopeptides may be targets of cancer immune surveillance in humans, and point to their importance for development of vaccine-based and T cell adoptive transfer immunotherapies.

Indexed as

Major Histocompatibility ComplexCD8-Positive T-LymphocytesCells, CulturedHumansImmunityLeukemiaPhosphopeptidesT-LymphocytesPhosphopeptides

Identifiers

PMID24048523
PMCPMC4071620
OpenAlexW1976251709

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.