Evidence map›Paper›PMID 24048501›Full record

ArticleInternational journal of legal medicine2014

Characterisation of novel and rare Y-chromosome short tandem repeat alleles in self-declared South Australian Aboriginal database.

Tegan E Collins, Renee Ottens, Kaye N Ballantyne, Nano Nagle, Julianne Henry, Duncan Taylor, Michael G Gardner, Alison J Fitch, Amanda Goodman, Roland A H van Oorschot and 2 more

Abstract readComparative Study
PubMed Publisher
In one paragraph

Article in International journal of legal medicine, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact, top 91% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed, 3 citations in OpenAlex.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 6 institutions in 1 country.

Tegan E CollinsForensic Science South Australia, 21 Divett Place, Adelaide, Australia.
Renee Ottens
Kaye N Ballantyne
Nano Nagle
Julianne Henry
Duncan Taylor
Michael G Gardner
Alison J Fitch
Amanda Goodman
Roland A H van Oorschot
R John Mitchell
Adrian Linacre
Flinders University · AUSouth Australia Pathology · AULa Trobe University · AUVictoria Police · AUSouth Australian Museum · AUUniversity of Adelaide · AU

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Y-chromosome short tandem repeats (Y-STRs) are used in forensic science laboratories all over the world, as their application is wide and often vital in solving casework. Analysis of an in-house database of South Australian self-declared Aboriginal males held by Forensic Science South Australia (FSSA) using the Applied Biosystem's AmpFℓSTR® Yfiler™ PCR Amplification Kit revealed 43 variant Y-STR alleles at 6 of the 17 loci. All variant alleles were sequenced to determine the exact repeat structure for each. As a high level of admixture has previously been found within the SA Aboriginal database, samples were haplogrouped using Y-SNPs to determine their likely geographical origin. Although a number of variant alleles were associated with non-Aboriginal Y-haplogroups, a high frequency was observed within the Australian K-M9 lineage. Detailed knowledge of these variant alleles may have further application in the development of new DNA markers for identification purposes, and in population and evolutionary studies of Australian Aborigines.

Indexed as

Databases, GeneticGene FrequencyGenetics, PopulationAustralian Aboriginal and Torres Strait Islander PeoplesChromosomes, Human, YCross-Cultural ComparisonDNA FingerprintingForensic GeneticsGenetic LociGenetic MarkersGenetic VariationHaplotypesHumansMaleMicrosatellite RepeatsSouth AustraliaGenetic Markers

Identifiers

PMID24048501
OpenAlexW2031852416

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.