Evidence map›Paper›PMID 24047414›Full record

ArticleACS chemical biology2013

Overcoming target-mediated quinolone resistance in topoisomerase IV by introducing metal-ion-independent drug-enzyme interactions.

Katie J Aldred, Heidi A Schwanz, Gangqin Li, Sylvia A McPherson, Charles L Turnbough, Robert J Kerns, Neil Osheroff

Abstract read
In one paragraph

Article in ACS chemical biology, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 32 papers.

0numbers the graph read from it
0cells of the map it votes in
32citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

32 citing papers in PubMed.

  1. Review
  2. Review
  3. Review
  4. Review
  5. Target-Mediated Fluoroquinolone Resistance inACS infectious diseases · 2024
    Article
  6. Review
  7. Article
  8. Article
  9. Quinolone antibiotics.MedChemComm · 2019
    Review
  10. Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Review
  17. Article
  18. Article
  19. Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Katie J AldredDepartments of †Biochemistry and ‡Medicine (Hematology/Oncology) and the §Vanderbilt Institute of Chemical Biology, Vanderbilt University School of Medicine , Nashville, Tennessee 37232-0146, United States.
Heidi A Schwanz
Gangqin Li
Sylvia A McPherson
Charles L Turnbough
Robert J Kerns
Neil Osheroff

Funding

BIOCHEMICAL &CHEMICAL TRAINING FOR CANCER RESEARCHT32CA009582 · NCI · VANDERBILT UNIVERSITY · PI David K Cortez · 1987 to 2026
$8.8M
FUNCTION AND BIOLOGY OF EUKARYOTIC DNA TOPOISOMERASESR01GM033944 · NIGMS · VANDERBILT UNIVERSITY · PI OSHEROFF, NEIL · 1985 to 2015
$5.5M
PREDOCTORAL TRAINING PROGRAM IN BIOTECHNOLOGYT32GM008365 · NIGMS · UNIVERSITY OF IOWA · PI KERNS, ROBERT JOHN · 1990 to 2021
$3.8M
Antibacterial Agents that Restrict the Emergence of ResistanceR01AI087671 · NIAID · UNIVERSITY OF IOWA · PI KERNS, ROBERT JOHN · 2010 to 2014
$1.9M
Structure and Function of the B. anthracis ExosporiumR56AI081775 · NIAID · UNIVERSITY OF ALABAMA AT BIRMINGHAM · PI TURNBOUGH, CHARLES LEE · 2009 to 2010
$870k
NCI NIH HHS T32 CA009582NIAID NIH HHS AI81775NIAID NIH HHS R01 AI087671NIAID NIH HHS R56 AI081775NIGMS NIH HHS GM33944NIGMS NIH HHS R01 GM033944NIGMS NIH HHS T32 GM008365
6 · The paper itself

Abstract

Quinolones, which target gyrase and topoisomerase IV, are the most widely prescribed antibacterials worldwide. Unfortunately, their use is threatened by the increasing prevalence of target-mediated drug resistance. Greater than 90% of mutations that confer quinolone resistance act by disrupting enzyme-drug interactions coordinated by a critical water-metal ion bridge. Quinazolinediones are quinolone-like drugs but lack the skeletal features necessary to support the bridge interaction. These compounds are of clinical interest, however, because they retain activity against the most common quinolone resistance mutations. We utilized a chemical biology approach to determine how quinazolinediones overcome quinolone resistance in Bacillus anthracis topoisomerase IV. Quinazolinediones that retain activity against quinolone-resistant topoisomerase IV do so primarily by establishing novel interactions through the C7 substituent, rather than the drug skeleton. Because some quinolones are highly active against human topoisomerase IIα, we also determined how clinically relevant quinolones discriminate between the bacterial and human enzymes. Clinically relevant quinolones display poor activity against topoisomerase IIα because the human enzyme cannot support drug interactions mediated by the water-metal ion bridge. However, the inclusion of substituents that allow quinazolinediones to overcome topoisomerase IV-mediated quinolone resistance can cause cross-reactivity against topoisomerase IIα. Therefore, a major challenge in designing drugs that overcome quinolone resistance lies in the ability to identify substituents that mediate strong interactions with the bacterial, but not the human, enzymes. On the basis of our understanding of quinolone-enzyme interactions, we have identified three compounds that display high activity against quinolone-resistant B. anthracis topoisomerase IV but low activity against human topoisomerase IIα.

Indexed as

Anti-Bacterial AgentsAntigens, NeoplasmBacillus anthracisCations, DivalentDNA, BacterialDNA-Binding ProteinsDNA CleavageDNA Topoisomerase IVDNA Topoisomerases, Type IIDrug Resistance, BacterialHumansKineticsMagnesiumMutationQuinazolinonesQuinolonesAnti-Bacterial AgentsAntigens, NeoplasmCations, DivalentDNA, BacterialDNA-Binding ProteinsDNA Topoisomerase IVDNA Topoisomerases, Type IIMagnesiumQuinazolinonesQuinolonesRecombinant ProteinsWater

Identifiers

PMID24047414
PMCPMC3870039

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.