Evidence map›Paper›PMID 24045995›Full record

ArticleInvestigative ophthalmology & visual science2013

IQCB1 and PDE6B mutations cause similar early onset retinal degenerations in two closely related terrier dog breeds.

Orly Goldstein, Jason G Mezey, Peter A Schweitzer, Adam R Boyko, Chuan Gao, Carlos D Bustamante, Julie Ann Jordan, Gustavo D Aguirre, Gregory M Acland

Open access · hybridAbstract readComparative Study
In one paragraph

Article in Investigative ophthalmology & visual science, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 32 papers.

0numbers the graph read from it
0cells of the map it votes in
32citing papers in PubMed
1.6field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

32 citing papers in PubMed, 46 citations in OpenAlex.

  1. Review
  2. Review
  3. Canine models of inherited retinal diseases: from neglect to well-recognized translational value.Mammalian genome : official journal of the International Mammalian Genome Society · 2025
    Review
  4. Article
  5. Article
  6. Article
  7. Canine and Feline Models of Inherited Retinal Diseases.Cold Spring Harbor perspectives in medicine · 2024
    Review
  8. Article
  9. Article
  10. Article
  11. Article
  12. Review
  13. Article
  14. Article
  15. Gene therapy reforms photoreceptor structure and restores vision in NPHP5-associated Leber congenital amaurosis.Molecular therapy : the journal of the American Society of Gene Therapy · 2021
    Article
  16. Article
  17. Review
  18. Review
  19. AGenes · 2019
    Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 4 institutions in 1 country.

Orly GoldsteinBaker Institute for Animal Health, Cornell University College of Veterinary Medicine, Ithaca, New York.
Jason G Mezey
Peter A Schweitzer
Adam R Boyko
Chuan Gao
Carlos D Bustamante
Julie Ann Jordan
Gustavo D Aguirre
Gregory M Acland
Cornell University · USNew York State College of Veterinary Medicine · USStanford University · USUniversity of Pennsylvania · US

Funding

MODELS OF HEREDITY RETINAL DEGENERATIONR01EY006855 · NEI · UNIVERSITY OF PENNSYLVANIA · PI GUSTAVO David AGUIRRE, William A. Beltran · 1992 to 2026
$20.7M
Translational Research for Retinal Degeneration TherapiesR01EY017549 · NEI · UNIVERSITY OF PENNSYLVANIA · PI BELTRAN, WILLIAM A. · 2007 to 2024
$14.1M
Tools for Genetic and Genomic Studies in the DogR24GM082910 · NIGMS · CORNELL UNIVERSITY · PI ACLAND, GREGORY M · 2008 to 2011
$1.5M
NEI NIH HHS EY006855NEI NIH HHS EY17549NEI NIH HHS R01 EY006855NEI NIH HHS R01 EY017549NIGMS NIH HHS R24 GM082910NIGMS NIH HHS R24GM082910PHS HHS 2PNEY018241-06
6 · The paper itself

Abstract

purposeTo identify the causative mutations in two early-onset canine retinal degenerations, crd1 and crd2, segregating in the American Staffordshire terrier and the Pit Bull Terrier breeds, respectively.

methodsRetinal morphology of crd1- and crd2-affected dogs was evaluated by light microscopy. DNA was extracted from affected and related unaffected controls. Association analysis was undertaken using the Illumina Canine SNP array and PLINK (crd1 study), or the Affymetrix Version 2 Canine array, the "MAGIC" genotype algorithm, and Fisher's Exact test for association (crd2 study). Positional candidate genes were evaluated for each disease.

resultsStructural photoreceptor abnormalities were observed in crd1-affected dogs as young as 11-weeks old. Rod and cone inner segment (IS) and outer segments (OS) were abnormal in size, shape, and number. In crd2-affected dogs, rod and cone IS and OS were abnormal as early as 3 weeks of age, progressing with age to severe loss of the OS, and thinning of the outer nuclear layer (ONL) by 12 weeks of age. Genome-wide association study (GWAS) identified association at the telomeric end of CFA3 in crd1-affected dogs and on CFA33 in crd2-affected dogs. Candidate gene evaluation identified a three bases deletion in exon 21 of PDE6B in crd1-affected dogs, and a cytosine insertion in exon 10 of IQCB1 in crd2-affected dogs.

conclusionsIdentification of the mutations responsible for these two early-onset retinal degenerations provides new large animal models for comparative disease studies and evaluation of potential therapeutic approaches for the homologous human diseases.

Indexed as

Genetic Predisposition to DiseaseAnimalsCalmodulin-Binding ProteinsCyclic Nucleotide Phosphodiesterases, Type 6Disease Models, AnimalDNADNA Mutational AnalysisDogsFemaleGenome-Wide Association StudyGenotypeMaleMutationPedigreePhotoreceptor Cells, VertebrateRetinal DegenerationCalmodulin-Binding ProteinsCyclic Nucleotide Phosphodiesterases, Type 6DNAIQCB1 protein, humanPDE6B protein, humanGWASmutationretina

Identifiers

PMID24045995
PMCPMC3809947
OpenAlexW2033830146

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.