Evidence map›Paper›PMID 24045953›Full record

ArticleThe Journal of biological chemistry2013

Architectural organization of the metabolic regulatory enzyme ghrelin O-acyltransferase.

Martin S Taylor, Travis R Ruch, Po-Yuan Hsiao, Yousang Hwang, Pingfeng Zhang, Lixin Dai, Cheng Ran Lisa Huang, Christopher E Berndsen, Min-Sik Kim, Akhilesh Pandey and 5 more

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 32 papers.

0numbers the graph read from it
0cells of the map it votes in
32citing papers in PubMed
5.6field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

32 citing papers in PubMed, 65 citations in OpenAlex.

  1. Review
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  8. Review
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  11. Review
  12. Article
  13. An overview of ghrelinExpert opinion on therapeutic patents · 2020
    Review
  14. Ghrelin Signaling: GOAT and GHS-R1a Take a LEAP in Complexity.Trends in endocrinology and metabolism: TEM · 2020
    Review
  15. Article
  16. The ghrelinThe Journal of biological chemistry · 2019
    Article
  17. The Journal of biological chemistry · 2019
    Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors at 6 institutions in 2 countries.

Martin S TaylorFrom the Department of Pharmacology and Molecular Sciences,; the High Throughput Biology Center and Department of Molecular Biology and Genetics.
Travis R Ruchthe Department of Cell Biology.
Po-Yuan HsiaoFrom the Department of Pharmacology and Molecular Sciences.
Yousang HwangFrom the Department of Pharmacology and Molecular Sciences.
Pingfeng Zhangthe Program in Gene Expression and Regulation, The Wistar Institute, Philadelphia, Pennsylvania 19104.
Lixin Daithe High Throughput Biology Center and Department of Molecular Biology and Genetics.
Cheng Ran Lisa Huangthe High Throughput Biology Center and Department of Molecular Biology and Genetics,; the McKusick-Nathans Institute of Genetic Medicine.
Christopher E Berndsenthe Howard Hughes Medical Institute and Department of Biophysics and Biophysical Chemistry, The Johns Hopkins University School of Medicine, Baltimore, Maryland 21205.
Min-Sik Kimthe McKusick-Nathans Institute of Genetic Medicine.
Akhilesh Pandeythe McKusick-Nathans Institute of Genetic Medicine.
Cynthia Wolbergerthe Howard Hughes Medical Institute and Department of Biophysics and Biophysical Chemistry, The Johns Hopkins University School of Medicine, Baltimore, Maryland 21205.
Ronen Marmorsteinthe Program in Gene Expression and Regulation, The Wistar Institute, Philadelphia, Pennsylvania 19104; the Department of Chemistry, University of Pennsylvania, Philadelphia, Pennsylvania 19104.
Carolyn Machamerthe Department of Cell Biology,. Electronic address: machamer@jhmi.edu.
Jef D Boekethe High Throughput Biology Center and Department of Molecular Biology and Genetics,. Electronic address: machamer@jhmi.edu.
Philip A ColeFrom the Department of Pharmacology and Molecular Sciences,. Electronic address: pcole@jhmi.edu.
High Throughput Biology (United States) · USLaboratory of Molecular Genetics · PLHoward Hughes Medical Institute · USJohns Hopkins University · USThe Wistar Institute · USUniversity of Pennsylvania · US

Funding

UNIVERSITY OF PENNSYLVANIA CAN CTR SUPPORT GRANTP30CA016520 · NCI · UNIVERSITY OF PENNSYLVANIA · PI SHELLEY L BERGER · 1985 to 2026
$222.3M
Predoctoral Training Program in Human GeneticsT32GM007814 · NIGMS · JOHNS HOPKINS UNIVERSITY · PI VALLE, DAVID · 1985 to 2021
$10.6M
Networks, Pathways and Dynamics of Lysine ModificationU54GM103520 · NIGMS · JOHNS HOPKINS UNIVERSITY · PI BADER, JOEL S. · 2012 to 2013
$7.0M
Structure/Function of Histone AcetyltransferasesR01GM060293 · NIGMS · WISTAR INSTITUTE · PI MARMORSTEIN, RONEN · 2000 to 2016
$5.3M
Protein Acylation and Methylation Mechanisms_Administrative SupplementR37GM062437 · NIGMS · JOHNS HOPKINS UNIVERSITY · PI COLE, PHILIP A · 2013 to 2022
$4.1M
Mechanisms &Inhibition of Histone AcetyltransferasesR01GM062437 · NIGMS · JOHNS HOPKINS UNIVERSITY · PI COLE, PHILIP A · 2001 to 2012
$3.8M
Howard Hughes Medical InstituteNCI NIH HHS P30 CA016520NIGMS NIH HHS 8U54GM103520NIGMS NIH HHS GM62437NIGMS NIH HHS R01 GM060293NIGMS NIH HHS R01 GM062437NIGMS NIH HHS R37 GM062437NIGMS NIH HHS T32 GM007814NIGMS NIH HHS U54 GM103520
6 · The paper itself

Abstract

Ghrelin O-acyltransferase (GOAT) is a polytopic integral membrane protein required for activation of ghrelin, a secreted metabolism-regulating peptide hormone. Although GOAT is a potential therapeutic target for the treatment of obesity and diabetes and plays a key role in other physiologic processes, little is known about its structure or mechanism. GOAT is a member of the membrane-bound O-acyltransferase (MBOAT) family, a group of polytopic integral membrane proteins involved in lipid-biosynthetic and lipid-signaling reactions from prokaryotes to humans. Here we use phylogeny and a variety of bioinformatic tools to predict the topology of GOAT. Using selective permeabilization indirect immunofluorescence microscopy in combination with glycosylation shift immunoblotting, we demonstrate that GOAT contains 11 transmembrane helices and one reentrant loop. Development of the V5Glyc tag, a novel, small, and sensitive dual topology reporter, facilitated these experiments. The MBOAT family invariant residue His-338 is in the ER lumen, consistent with other family members, but conserved Asn-307 is cytosolic, making it unlikely that both are involved in catalysis. Photocross-linking of synthetic ghrelin analogs and inhibitors demonstrates binding to the C-terminal region of GOAT, consistent with a role of His-338 in the active site. This knowledge of GOAT architecture is important for a deeper understanding of the mechanism of GOAT and other MBOATs and could ultimately advance the discovery of selective inhibitors for these enzymes.

Indexed as

AcyltransferasesAnimalsCatalysisChickensComputational BiologyDogsGhrelinHeLa CellsHumansProtein Structure, SecondaryProtein Structure, TertiaryStructure-Activity RelationshipAcyltransferasesGhrelinMBOAT4 protein, humanEndoplasmic Reticulum (ER)EnzymeLipidsMembrane ProteinsMetabolismPeptide Hormones

Identifiers

PMID24045953
PMCPMC3820860
OpenAlexW2047958999

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.