Evidence map›Paper›PMID 24042108›Full record

ArticleInfection and immunity2013

Global transcriptome analysis of Staphylococcus aureus biofilms in response to innate immune cells.

Tyler D Scherr, Christelle M Roux, Mark L Hanke, Amanda Angle, Paul M Dunman, Tammy Kielian

Abstract read
In one paragraph

Article in Infection and immunity, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 43 papers.

0numbers the graph read from it
0cells of the map it votes in
43citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

43 citing papers in PubMed.

  1. Article
  2. Review
  3. Article
  4. Review
  5. Structural characteristics, functions, and counteracting strategies of biofilms inComputational and structural biotechnology journal · 2025
    Review
  6. CXCR2 perturbation promotesJournal of medical microbiology · 2024
    Article
  7. Article
  8. Review
  9. Article
  10. SpoT-mediated NapA upregulation promotes oxidative stress-inducedAntimicrobial agents and chemotherapy · 2023
    Article
  11. Article
  12. Review
  13. Review
  14. Article
  15. Review
  16. Colonization and Infection of Indwelling Medical Devices byInternational journal of molecular sciences · 2022
    Review
  17. Review
  18. Immunometabolism in biofilm infection: lessons from cancer.Molecular medicine (Cambridge, Mass.) · 2022
    Review
  19. FmhA and FmhC ofThe Journal of biological chemistry · 2020
    Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Tyler D ScherrDepartment of Pathology and Microbiology, University of Nebraska Medical Center, Omaha, Nebraska, USA.
Christelle M Roux
Mark L Hanke
Amanda Angle
Paul M Dunman
Tammy Kielian

Funding

The S. aureus biofilm lifecycleP01AI083211 · NIAID · UNIVERSITY OF NEBRASKA MEDICAL CENTER · PI BAYLES, KENNETH W. · 2009 to 2023
$32.1M
NIAID NIH HHS P01 AI083211
6 · The paper itself

Abstract

The potent phagocytic and microbicidal activities of neutrophils and macrophages are among the first lines of defense against bacterial infections. Yet Staphylococcus aureus is often resistant to innate immune defense mechanisms, especially when organized as a biofilm. To investigate how S. aureus biofilms respond to macrophages and neutrophils, gene expression patterns were profiled using Affymetrix microarrays. The addition of macrophages to S. aureus static biofilms led to a global suppression of the biofilm transcriptome with a wide variety of genes downregulated. Notably, genes involved in metabolism, cell wall synthesis/structure, and transcription/translation/replication were among the most highly downregulated, which was most dramatic at 1 h compared to 24 h following macrophage addition to biofilms. Unexpectedly, few genes were enhanced in biofilms after macrophage challenge. Unlike coculture with macrophages, coculture of S. aureus static biofilms with neutrophils did not greatly influence the biofilm transcriptome. Collectively, these experiments demonstrate that S. aureus biofilms differentially modify their gene expression patterns depending on the leukocyte subset encountered.

Indexed as

AnimalsBacterial ProteinsBiofilmsCells, CulturedGene Expression ProfilingGene Expression Regulation, BacterialImmunity, InnateMacrophagesMiceMice, Inbred C57BLNeutrophilsStaphylococcal InfectionsStaphylococcus aureusTrans-ActivatorsTranscriptomeVirulence FactorsAgr protein, Staphylococcus aureusBacterial ProteinsTrans-ActivatorsVirulence Factors

Identifiers

PMID24042108
PMCPMC3837966

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.