Evidence map›Paper›PMID 24040112›Full record

ArticlePloS one2013

Multicenter intestinal current measurements in rectal biopsies from CF and non-CF subjects to monitor CFTR function.

John P Clancy, Rhonda D Szczesniak, Melissa A Ashlock, Sarah E Ernst, Lijuan Fan, Douglas B Hornick, Philip H Karp, Umer Khan, James Lymp, Alicia J Ostmann and 8 more

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed
4.3field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed, 60 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Review
  5. Article
  6. Assays of CFTR Function In Vitro, Ex Vivo and In Vivo.International journal of molecular sciences · 2022
    Review
  7. Article
  8. Review
  9. Article
  10. Review
  11. Recent progress in translational cystic fibrosis research using precision medicine strategies.Journal of cystic fibrosis : official journal of the European Cystic Fibrosis Society · 2018
    Review
  12. Review
  13. Detection of CFTR function and modulation in primary human nasal cell spheroids.Journal of cystic fibrosis : official journal of the European Cystic Fibrosis Society · 2018
    Article
  14. Review
  15. Biomarkers for cystic fibrosis drug development.Journal of cystic fibrosis : official journal of the European Cystic Fibrosis Society · 2016
    Review
  16. Review
  17. Review
  18. Article
  19. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

18 authors at 8 institutions in 1 country.

John P ClancyDepartment of Pediatrics, Cincinnati Children's Hospital Medical Center and the University of Cincinnati, Cincinnati, Ohio, United States of America.
Rhonda D Szczesniak
Melissa A Ashlock
Sarah E Ernst
Lijuan Fan
Douglas B Hornick
Philip H Karp
Umer Khan
James Lymp
Alicia J Ostmann
Amir Rezayat
Timothy D Starner
Shajan P Sugandha
Hongtao Sun
Nancy Quinney
Scott H Donaldson
Steven M Rowe
Sherif E Gabriel
University of Iowa · USCincinnati Children's Hospital Medical Center · USUniversity of Alabama at Birmingham · USUniversity of Cincinnati · USUniversity of North Carolina at Chapel Hill · USCystic Fibrosis Foundation · USNivalis Therapeutics (United States) · USSeattle Children's Hospital · US

Funding

Vector CoreP30DK065988 · NIDDK · UNIV OF NORTH CAROLINA CHAPEL HILL · PI Richard Charles Boucher, Martina Gentzsch · 2004 to 2026
$26.5M
UAB CF Research and Translation Core CenterP30DK072482 · NIDDK · UNIVERSITY OF ALABAMA AT BIRMINGHAM · PI David M. Bedwell · 2007 to 2026
$23.0M
Iowa Phase II Clinical Trials of Novel Therapies for Lung Diseases (U01U01HL102288 · NHLBI · UNIVERSITY OF IOWA · PI DURAIRAJ, LAKSHMI · 2010 to 2012
$5.3M
NHLBI NIH HHS U01 HL102288NIDDK NIH HHS P30 DK065988NIDDK NIH HHS P30 DK072482PHS HHS U UL1025777
6 · The paper itself

Abstract

Intestinal current measurements (ICM) from rectal biopsies are a sensitive means to detect cystic fibrosis transmembrane conductance regulator (CFTR) function, but have not been optimized for multicenter use. We piloted multicenter standard operating procedures (SOPs) to detect CFTR activity by ICM and examined key questions for use in clinical trials. SOPs for ICM using human rectal biopsies were developed across three centers and used to characterize ion transport from non-CF and CF subjects (two severe CFTR mutations). All data were centrally evaluated by a blinded interpreter. SOPs were then used across four centers to examine the effect of cold storage on CFTR currents and compare CFTR currents in biopsies from one subject studied simultaneously either at two sites (24 hours post-biopsy) or when biopsies were obtained by either forceps or suction. Rectal biopsies from 44 non-CF and 17 CF subjects were analyzed. Mean differences (µA/cm(2); 95% confidence intervals) between CF and non-CF were forskolin/IBMX=102.6(128.0 to 81.1), carbachol=96.3(118.7 to 73.9), forskolin/IBMX+carbachol=200.9(243.1 to 158.6), and bumetanide=-44.6 (-33.7 to -55.6) (P<0.005, CF vs non-CF for all parameters). Receiver Operating Characteristic curves indicated that each parameter discriminated CF from non-CF subjects (area under the curve of 0.94-0.98). CFTR dependent currents following 18-24 hours of cold storage for forskolin/IBMX, carbachol, and forskolin/IBMX+carbachol stimulation (n=17 non-CF subjects) were 44%, 47.5%, and 47.3%, respectively of those in fresh biopsies. CFTR-dependent currents from biopsies studied after cold storage at two sites simultaneously demonstrated moderate correlation (n=14 non-CF subjects, Pearson correlation coefficients 0.389, 0.484, and 0.533). Similar CFTR dependent currents were detected from fresh biopsies obtained by either forceps or suction (within-subject comparisons, n=22 biopsies from three non-CF subjects). Multicenter ICM is a feasible CFTR outcome measure that discriminates CF from non-CF ion transport, offers unique advantages over other CFTR bioassays, and warrants further development as a potential CFTR biomarker.

Indexed as

AdultAgedBiopsyChloridesCyclic AMPCystic FibrosisCystic Fibrosis Transmembrane Conductance RegulatorFemaleHumansMaleMiddle AgedRectumROC CurveSodiumYoung AdultChloridesCyclic AMPCystic Fibrosis Transmembrane Conductance RegulatorSodium

Identifiers

PMID24040112
PMCPMC3769519
OpenAlexW2059659021

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.