Evidence map›Paper›PMID 24039878›Full record

ArticlePloS one2013

Assessing the validity of asthma associations for eight candidate genes and age at diagnosis effects.

María Pino-Yanes, Almudena Corrales, José Cumplido, Paloma Poza, Inmaculada Sánchez-Machín, Anselmo Sánchez-Palacios, Javier Figueroa, Orlando Acosta-Fernández, Nisa Buset, José Carlos García-Robaina and 4 more

Erratum issuedOpen access · goldAbstract read
In one paragraph

Article in PloS one, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 7 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed, 2 pooled it
1.6field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 2 syntheses or guidelines pooled it, 15 citations in OpenAlex.

  1. Pooled it
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4 · The record

Corrections and comments

  • Erratum issued
5 · Who and what money

Authors and funding

14 authors at 6 institutions in 2 countries.

María Pino-YanesCentro de Investigación Biomédica en Red de Enfermedades Respiratorias (CIBERES), Instituto de Salud Carlos III, Madrid, Spain ; Research Unit, Hospital Universitario Nuestra Señora de Candelaria, Santa Cruz de Tenerife, Spain.
Almudena Corrales
José Cumplido
Paloma Poza
Inmaculada Sánchez-Machín
Anselmo Sánchez-Palacios
Javier Figueroa
Orlando Acosta-Fernández
Nisa Buset
José Carlos García-Robaina
Mariano Hernández
Jesús Villar
Teresa Carrillo
Carlos Flores
Hospital Universitario de Gran Canaria Doctor Negrín · ESHospital Universitario Insular de Gran Canaria · ESHospital Universitario Nuestra Señora de Candelaria · ESUniversidad de La Laguna · ESHospital Universitario de Canarias · ESInstituto de Salud Carlos III · ES

Funding

Wellcome Trust
6 · The paper itself

Abstract

backgroundBefore the advent of genome-wide association studies (GWAS), ADAM33, ADRB2, CD14, MS4A2 (alias FCER1B), IL13, IL4, IL4R, and TNF constituted the most replicated non-HLA candidate genes with asthma and related traits. However, except for the IL13-IL4 region, none of these genes have been found in close proximity of genome-wide significant hits among GWAS for asthma or related traits. Here we aimed to assess the reproducibility of these asthma associations and to test if associations were more evident considering the effect of age at diagnosis. METHODOLOGY/PRINCIPAL

findingsWe systematically evaluated 286 common single nucleotide polymorphisms (SNPs) of these 8 genes in a sample of 1,865 unrelated Spanish individuals (606 asthmatics and 1,259 controls). We found that variants at MS4A2, IL4R and ADAM33 genes demonstrated varying association effects with the age at diagnosis of asthma, with 10 SNPs showing study-wise significance after the multiple comparison adjustment. In addition, in silico replication with GWAS data supported the association of IL4R. CONCLUSIONS/SIGNIFICANCE: Our results support the important role of MS4A2, IL4R and ADAM33 genes in asthma and/or atopy susceptibility. However, additional studies in larger samples sets are needed to firmly implicate these genes in asthma susceptibility, and also to identify the causal variation underlying the associations found.

Indexed as

Polymorphism, Single NucleotideADAM ProteinsAdolescentAdultAllelesAsthmaCase-Control StudiesChildChromosome MappingGene FrequencyGenetic Association StudiesGenetic Predisposition to DiseaseGenotypeHumansInterleukin-4 Receptor alpha SubunitOdds RatioADAM33 protein, humanADAM ProteinsIL4R protein, humanInterleukin-4 Receptor alpha SubunitMS4A2 protein, humanReceptors, IgE

Identifiers

PMID24039878
PMCPMC3767824
OpenAlexW2083767594

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.