Evidence map›Paper›PMID 24039746›Full record

ArticlePloS one2013

Replicate phylogenies and post-glacial range expansion of the pitcher-plant mosquito, Wyeomyia smithii, in North America.

Clayton Merz, Julian M Catchen, Victor Hanson-Smith, Kevin J Emerson, William E Bradshaw, Christina M Holzapfel

Abstract read
In one paragraph

Article in PloS one, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed.

  1. Article
  2. Clock-talk: have we forgotten about geographic variation?Journal of comparative physiology. A, Neuroethology, sensory, neural, and behavioral physiology · 2024
    Article
  3. Article
  4. Review
  5. Article
  6. Article
  7. Molecular pathways to nonbiting mosquitoes.Proceedings of the National Academy of Sciences of the United States of America · 2018
    Article
  8. Evolutionary transition from blood feeding to obligate nonbiting in a mosquito.Proceedings of the National Academy of Sciences of the United States of America · 2018
    Article
  9. Article
  10. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Clayton MerzInstitute of Ecology and Evolution, University of Oregon, Eugene, Oregon, United States of America.
Julian M Catchen
Victor Hanson-Smith
Kevin J Emerson
William E Bradshaw
Christina M Holzapfel

Funding

Rapid and cost-efficient genotyping tools for stuides of threespine sticklebackR24GM079486 · NIGMS · UNIVERSITY OF OREGON · PI CRESKO, WILLIAM A · 2007 to 2010
$708k
Elucidating the effects of structural variation on cis-regulation in sticklebackF32GM095213 · NIGMS · UNIVERSITY OF OREGON · PI CATCHEN, JULIAN MICHAEL · 2010 to 2012
$153k
NIGMS NIH HHS 1R24GM079486-01A1NIGMS NIH HHS 5F3GM095213NIGMS NIH HHS F32 GM095213NIGMS NIH HHS R24 GM079486
6 · The paper itself

Abstract

Herein we tested the repeatability of phylogenetic inference based on high throughput sequencing by increased taxon sampling using our previously published techniques in the pitcher-plant mosquito, Wyeomyia smithii in North America. We sampled 25 natural populations drawn from different localities nearby 21 previous collection localities and used these new data to construct a second, independent phylogeny, expressly to test the reproducibility of phylogenetic patterns. Comparison of trees between the two data sets based on both maximum parsimony and maximum likelihood with Bayesian posterior probabilities showed close correspondence in the grouping of the most southern populations into clear clades. However, discrepancies emerged, particularly in the middle of W. smithii's current range near the previous maximum extent of the Laurentide Ice Sheet, especially concerning the most recent common ancestor to mountain and northern populations. Combining all 46 populations from both studies into a single maximum parsimony tree and taking into account the post-glacial historical biogeography of associated flora provided an improved picture of W. smithii's range expansion in North America. In a more general sense, we propose that extensive taxon sampling, especially in areas of known geological disruption is key to a comprehensive approach to phylogenetics that leads to biologically meaningful phylogenetic inference.

Indexed as

Animal DistributionAnimalsBayes TheoremCanadaCulicidaeHigh-Throughput Nucleotide SequencingLikelihood FunctionsModels, GeneticPhylogenyPhylogeographyReproducibility of ResultsSequence Analysis, DNAUnited States

Identifiers

PMID24039746
PMCPMC3765167

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.