Evidence map›Paper›PMID 24039608›Full record

ArticlePLoS genetics2013

Cell interactions and patterned intercalations shape and link epithelial tubes in C. elegans.

Jeffrey P Rasmussen, Jessica L Feldman, Sowmya Somashekar Reddy, James R Priess

Open access · goldAbstract read
In one paragraph

Article in PLoS genetics, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
0.6field-weighted citation impact, top 35% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 28 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Review
  6. Epithelial morphogenesis, tubulogenesis and forces in organogenesis.Current topics in developmental biology · 2021
    Review
  7. Article
  8. Article
  9. A high-content imaging approach to profileDevelopment (Cambridge, England) · 2019
    Article
  10. Article
  11. Auto-fusion and the shaping of neurons and tubes.Seminars in cell & developmental biology · 2016
    Review
  12. Article
  13. Article
  14. Article
  15. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 1 country.

Jeffrey P RasmussenFred Hutchinson Cancer Research Center, Seattle, Washington, United States of America ; Howard Hughes Medical Institute, Chevy Chase, Maryland, United States of America ; Molecular and Cellular Biology Program, University of Washington, Seattle, Washington, United States of America.
Jessica L Feldman
Sowmya Somashekar Reddy
James R Priess
Fred Hutch Cancer Center · USUniversity of Washington · US

Funding

Enhancing and expanding the CGC Strain CollectionP40OD010440 · OD · UNIVERSITY OF MINNESOTA · PI Aric L Daul, Ann E. Rougvie · 2012 to 2026
$7.5M
INTERDISCIPLINARY TRAINING IN DEVELOPMENTAL BIOLOGYT32HD007183 · NICHD · UNIVERSITY OF WASHINGTON · PI RAIBLE, DAVID W · 1985 to 2015
$5.7M
Mechanisms of epithelial remodeling during organ development in C. elegansR01GM098583 · NIGMS · FRED HUTCHINSON CANCER RESEARCH CENTER · PI PRIESS, JAMES R · 2011 to 2020
$4.0M
Howard Hughes Medical InstituteNICHD NIH HHS T32 HD007183NIGMS NIH HHS R01 GM098583NIH HHS P40 OD010440
6 · The paper itself

Abstract

Many animal organs are composed largely or entirely of polarized epithelial tubes, and the formation of complex organ systems, such as the digestive or vascular systems, requires that separate tubes link with a common polarity. The Caenorhabditis elegans digestive tract consists primarily of three interconnected tubes-the pharynx, valve, and intestine-and provides a simple model for understanding the cellular and molecular mechanisms used to form and connect epithelial tubes. Here, we use live imaging and 3D reconstructions of developing cells to examine tube formation. The three tubes develop from a pharynx/valve primordium and a separate intestine primordium. Cells in the pharynx/valve primordium polarize and become wedge-shaped, transforming the primordium into a cylindrical cyst centered on the future lumenal axis. For continuity of the digestive tract, valve cells must have the same, radial axis of apicobasal polarity as adjacent intestinal cells. We show that intestinal cells contribute to valve cell polarity by restricting the distribution of a polarizing cue, laminin. After developing apicobasal polarity, many pharyngeal and valve cells appear to explore their neighborhoods through lateral, actin-rich lamellipodia. For a subset of cells, these lamellipodia precede more extensive intercalations that create the valve. Formation of the valve tube begins when two valve cells become embedded at the left-right boundary of the intestinal primordium. Other valve cells organize symmetrically around these two cells, and wrap partially or completely around the orthogonal, lumenal axis, thus extruding a small valve tube from the larger cyst. We show that the transcription factors DIE-1 and EGL-43/EVI1 regulate cell intercalations and cell fates during valve formation, and that the Notch pathway is required to establish the proper boundary between the pharyngeal and valve tubes.

Indexed as

OrganogenesisAnimalsBody PatterningCaenorhabditis elegansCaenorhabditis elegans ProteinsCell CommunicationCell DifferentiationCell PolarityEpithelial CellsGastrointestinal TractIntestinal MucosaIntestinesLamininPharynxReceptors, NotchTranscription FactorsCaenorhabditis elegans ProteinsDIE-1 protein, C elegansEgl-43 protein, C elegansLamininReceptors, NotchTranscription Factors

Identifiers

PMID24039608
PMCPMC3764189
OpenAlexW2085859696

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.