Evidence map›Paper›PMID 24039126›Full record

ArticleDevelopmental neurobiology2014

Differential methylation of the micro-RNA 7b gene targets postnatal maturation of murine neuronal Mecp2 gene expression.

Yongjun Chen, Bo-Chul Shin, Shanthie Thamotharan, Sherin U Devaskar

Open access · greenAbstract read
In one paragraph

Article in Developmental neurobiology, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
1.4field-weighted citation impact, top 18% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 20 citations in OpenAlex.

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  15. Environmental alterations of epigenetics prior to the birth.International review of neurobiology · 2014
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 2 countries.

Yongjun Chen *Department of Pediatrics, Division of Neonatology and Developmental Biology and Neonatal Research Center, David Geffen School of Medicine at UCLA, Los Angeles, CA, USA.
Bo-Chul Shin *Department of Pediatrics, Division of Neonatology and Developmental Biology and Neonatal Research Center, David Geffen School of Medicine at UCLA, Los Angeles, CA, USA.
Shanthie ThamotharanDepartment of Pediatrics, Division of Neonatology and Developmental Biology and Neonatal Research Center, David Geffen School of Medicine at UCLA, Los Angeles, CA, USA.
Sherin U DevaskarDepartment of Pediatrics, Division of Neonatology and Developmental Biology and Neonatal Research Center, David Geffen School of Medicine at UCLA, Los Angeles, CA, USA.
University of California, Los Angeles · USTongji Hospital · CN

Funding

Prenatal Origins of Neurometabolic ConsequencesR01HD081206 · NICHD · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI DEVASKAR, SHERIN U · 2015 to 2024
$4.1M
POSTNATAL ASPECTS OF A GLUCOSE TRANSPORTERR01HD033997 · NICHD · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI DEVASKAR, SHERIN U · 1995 to 2008
$3.1M
PERINATAL METABOLIC AND HORMONAL EFFECTSR01HD025024 · NICHD · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI DEVASKAR, SHERIN U · 1996 to 2010
$2.6M
DEVELOPMENTAL REGULATION OF NEURON INSULIN-LIKE PEPTIDER29HD025024 · NICHD · SAINT LOUIS UNIVERSITY · PI DEVASKAR, SHERIN U. · 1989 to 1993
–
NICHD NIH HHS HD25024NICHD NIH HHS HD33997NICHD NIH HHS R01 HD025024NICHD NIH HHS R01 HD033997NICHD NIH HHS R01 HD081206
6 · The paper itself

Abstract

DNA methylation and microRNAs (miRNAs) play crucial roles in maturation of postnatal mouse neurons. Aberrant DNA methylation and/or altered miRNA expression cause postnatal neurodevelopmental disorders. In general, DNA methylation in the 5'-flanking region suppresses gene expression through recruitment of methyl-CpG binding domain proteins (MBPs) to the cytosine residues of CpG dinucleotides. X-linked MeCP2 (methyl-CpG binding protein 2), a member of MBPs, is a methylation-associated transcriptional repressor with other functions in the central nervous system (CNS). miRNAs negatively regulate gene expression by targeting the 3'-untranslated region (3'UTR). Some miRNA genes harboring or being embedded in CpG islands undergo methylation-mediated silencing. One such miRNA is miR-7b which is differentially expressed through stages of neurodevelopment. In our present study, we focused on a canonical CpG island located in the 5'-flanking region of the murine miR-7b gene. Hypermethylation of this CpG island down-regulates miR-7b while recruiting MeCP2 to the methylated CpG dinucleotides. Meanwhile, Mecp2, a target of miR-7b, was up-regulated due to lack of restrain exerted by miR-7b during maturation of postnatal (PN) mouse neurons between PN3 and PN14. Our results indicate that miR-7b is a direct downstream gene transcriptional target while also being a negative post-transcriptional regulator of Mecp2 expression. We speculate that this bidirectional feed-back autoregulatory function of miR-7b and Mecp2 while linking DNA methylation and miRNA action maintains the homeostatic control of gene expression necessary during postnatal maturation of mammalian neurons.

Indexed as

Gene Expression3' Untranslated Regions5' Flanking RegionAnimalsBase SequenceBrainCell LineCells, CulturedCpG IslandsHippocampusMethylationMethyl-CpG-Binding Protein 2MiceMice, Inbred C57BLMicroRNAsMolecular Sequence Data3' Untranslated RegionsMecp2 protein, mouseMethyl-CpG-Binding Protein 2MicroRNAsMIRN7 microRNA, mouseDNA methylationepigenetic regulationhistone deacetylasemiRNA biogenesisneurodevelopmenttranscriptional control

Identifiers

PMID24039126
PMCPMC4208913
OpenAlexW1499225657

What OpenQuestion holds

Textmetadata
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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.