Evidence map›Paper›PMID 24036545›Full record

ArticleCell cycle (Georgetown, Tex.)2013

Human CAF-1-dependent nucleosome assembly in a defined system.

Lyudmila Y Kadyrova, Elena Rodriges Blanko, Farid A Kadyrov

Open access · hybridAbstract read
In one paragraph

Article in Cell cycle (Georgetown, Tex.), 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
1.6field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 22 citations in OpenAlex.

  1. Review
  2. Review
  3. Review
  4. Article
  5. Article
  6. Review
  7. Article
  8. Article
  9. RbAp48 is essential for viability of vertebrate cells and plays a role in chromosome stability.Chromosome research : an international journal on the molecular, supramolecular and evolutionary aspects of chromosome biology · 2016
    Article
  10. Article
  11. Article
  12. Article
  13. Review
  14. DNA triplet repeat expansion and mismatch repair.Annual review of biochemistry · 2015
    Review
  15. Article
  16. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Lyudmila Y KadyrovaDepartment of Biochemistry and Molecular Biology; Southern Illinois University School of Medicine; Carbondale, IL USA.
Elena Rodriges Blanko
Farid A Kadyrov
Southern Illinois University Carbondale · US

Funding

DNA mismatch repair in the nucleosomal environmentR01GM095758 · NIGMS · SOUTHERN ILLINOIS UNIVERSITY CARBONDALE · PI KADYROV, FARID · 2013 to 2017
$1.2M
NIGMS NIH HHS R01 GM095758NIGMS NIH HHS R01GM095758
6 · The paper itself

Abstract

Replication-coupled nucleosome assembly is a critical step in packaging newly synthesized DNA into chromatin. Previous studies have defined the importance of the histone chaperones CAF-1 and ASF1A, the replicative clamp PCNA, and the clamp loader RFC for the assembly of nucleosomes during DNA replication. Despite significant progress in the field, replication-coupled nucleosome assembly is not well understood. One of the complications in elucidating the mechanisms of replication-coupled nucleosome assembly is the lack of a defined system that faithfully recapitulates this important biological process in vitro. We describe here a defined system that assembles nucleosomal arrays in a manner dependent on the presence of CAF-1, ASF1A-H3-H4, H2A-H2B, PCNA, RFC, NAP1L1, ATP, and strand breaks. The loss of CAF-1 p48 subunit causes a strong defect in packaging DNA into nucleosomes by this system. We also show that the defined system forms nucleosomes on nascent DNA synthesized by the replicative polymerase δ. Thus, the developed system reproduces several key features of replication-coupled nucleosome assembly.

Indexed as

Chromatin Assembly and DisassemblyCell Cycle ProteinsCytosolDNADNA PackagingHeLa CellsHistonesHumansMolecular ChaperonesNucleosomesRecombinant ProteinsTranscription FactorsASF1A protein, humanCell Cycle ProteinsCNOT8 protein, humanDNAHistonesMolecular ChaperonesNucleosomesRecombinant ProteinsTranscription FactorsASF1CAF-1chromatinDNA polymerase deltahistone chaperonenucleosome assemblyPCNAreplicationRFC

Identifiers

PMID24036545
PMCPMC3885639
OpenAlexW2094497613

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.