Evidence map›Paper›PMID 24035395›Full record

ArticleCell reports2013

Integration of multiple nutrient cues and regulation of lifespan by ribosomal transcription factor Ifh1.

Ling Cai, Mark A McCormick, Brian K Kennedy, Benjamin P Tu

Open access · goldAbstract read
In one paragraph

Article in Cell reports, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 24 papers.

0numbers the graph read from it
0cells of the map it votes in
24citing papers in PubMed
2.2field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

24 citing papers in PubMed, 39 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. TheAging · 2023
    Article
  5. Article
  6. Review
  7. Article
  8. Article
  9. Nuclear mRNA Export and Aging.International journal of molecular sciences · 2022
    Review
  10. Article
  11. Yeast Crf1p: An activator in need is an activator indeed.Computational and structural biotechnology journal · 2022
    Review
  12. Review
  13. Article
  14. Article
  15. Article
  16. Article
  17. Building a KATalogue of acetyllysine targeting and function.Briefings in functional genomics · 2016
    Review
  18. Article
  19. Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 1 country.

Ling CaiDepartment of Biochemistry, UT Southwestern Medical Center, 5323 Harry Hines Boulevard, Dallas, TX 75390-9038, USA.
Mark A McCormick
Brian K Kennedy
Benjamin P Tu
Buck Institute for Research on Aging · USThe University of Texas Southwestern Medical Center · US

Funding

METABOLIC SIGNALS DRIVING CELL GROWTH & PROLIFERATIONR01GM094314 · NIGMS · UT SOUTHWESTERN MEDICAL CENTER · PI TU, BENJAMIN P · 2010 to 2019
$3.2M
TOR, Translation and AgingR01AG033373 · NIA · UNIVERSITY OF WASHINGTON · PI KENNEDY, BRIAN K · 2009 to 2013
$1.8M
NIA NIH HHS R01 AG033373NIA NIH HHS R01AG033373NIGMS NIH HHS R01 GM094314NIGMS NIH HHS R01GM094314
6 · The paper itself

Abstract

Ribosome biogenesis requires an enormous commitment of energy and resources in growing cells. In budding yeast, the transcriptional coactivator Ifh1p is an essential regulator of ribosomal protein (RP) gene transcription. Here, we report that Ifh1p is dynamically acetylated and phosphorylated as a function of the growth state of cells. Ifh1p is acetylated at numerous sites in its N-terminal region by Gcn5p and deacetylated by NAD(+)-dependent deacetylases of the sirtuin family. Acetylation of Ifh1p is responsive to intracellular acetyl-CoA levels and serves to regulate the stability of Ifh1p. The phosphorylation of Ifh1p is mediated by protein kinase A and is dependent on TORC1 signaling. Thus, multiple nutrient-sensing mechanisms converge on Ifh1p. However, instead of modulating overall rates of RP gene transcription or cell growth, the nutrient-responsive phosphorylation of Ifh1p plays a more prominent role in the regulation of cellular replicative lifespan.

Indexed as

AcetylationGene Expression Regulation, FungalOxygen ConsumptionPhosphorylationPromoter Regions, GeneticProtein Processing, Post-TranslationalRibosomesSaccharomyces cerevisiaeSaccharomyces cerevisiae ProteinsSignal TransductionTrans-ActivatorsTranscription, GeneticIFH1 protein, S cerevisiaeSaccharomyces cerevisiae ProteinsTrans-Activators

Identifiers

PMID24035395
PMCPMC3792855
OpenAlexW2143408062

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.