Evidence map›Paper›PMID 24034255›Full record

ArticleCell2013

Decoding information in cell shape.

Padmini Rangamani, Azi Lipshtat, Evren U Azeloglu, Rhodora Cristina Calizo, Mufeng Hu, Saba Ghassemi, James Hone, Suzanne Scarlata, Susana R Neves, Ravi Iyengar

Open access · greenAbstract read
In one paragraph

Article in Cell, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 101 papers.

0numbers the graph read from it
0cells of the map it votes in
101citing papers in PubMed
10.5field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

101 citing papers in PubMed, 195 citations in OpenAlex.

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41 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 3 institutions in 1 country.

Padmini RangamaniDepartment of Pharmacology and Systems Therapeutics and Systems Biology Center, Icahn School of Medicine at Mount Sinai, New York, NY 10029, USA.
Azi Lipshtat
Evren U Azeloglu
Rhodora Cristina Calizo
Mufeng Hu
Saba Ghassemi
James Hone
Suzanne Scarlata
Susana R Neves
Ravi Iyengar
Icahn School of Medicine at Mount Sinai · USColumbia University · USStony Brook University · US

Funding

System Biology Center in New YorkP50GM071558 · NIGMS · ICAHN SCHOOL OF MEDICINE AT MOUNT SINAI · PI IYENGAR, SRINIVAS RAVI V · 2007 to 2017
$22.8M
TR&D4 Spatial Modeling: Modeling Framework for Cell MotilityP41GM103313 · NIGMS · UNIVERSITY OF CONNECTICUT SCH OF MED/DNT · PI LOEW, LESLIE M · 2012 to 2018
$9.7M
Spatial Models of Cell Regulatory NetworksR01GM072853 · NIGMS · MOUNT SINAI SCHOOL OF MEDICINE OF NYU · PI HONE, JAMES C, IYENGAR, SRINIVAS RAVI V · 2005 to 2019
$6.1M
Interdisciplinary Program in Cell &Mol EndocrinologyT32DK007645 · NIDDK · MOUNT SINAI SCHOOL OF MEDICINE OF NYU · PI DAVIES, TERRY FRANCIS · 1990 to 2009
$2.3M
Advanced Microscopy Shared Resource FacilityR24CA095823 · NCI · MOUNT SINAI SCHOOL OF MEDICINE OF NYU · PI FRIEDRICH, VICTOR LOUIS · 2002 to 2006
$1.3M
CONFOCAL MICROSCOPE FACILITYS10RR009145 · NCRR · MOUNT SINAI SCHOOL OF MEDICINE OF CUNY · PI MASUR, SANDRA K · 1994 to 1994
–
Howard Hughes Medical InstituteNCI NIH HHS 5R24 CA095823-04NCI NIH HHS R24 CA095823NCRR NIH HHS 1 S10 RR0 9145-01NIDDK NIH HHS DK007645NIDDK NIH HHS T32 DK007645NIGMS NIH HHS GM-071558NIGMS NIH HHS GM-072853NIGMS NIH HHS P41 GM103313NIGMS NIH HHS P41-GM103313NIGMS NIH HHS P50 GM071558NIGMS NIH HHS R01 GM072853
6 · The paper itself

Abstract

Shape is an indicator of cell health. But how is the information in shape decoded? We hypothesize that decoding occurs by modulation of signaling through changes in plasma membrane curvature. Using analytical approaches and numerical simulations, we studied how elongation of cell shape affects plasma membrane signaling. Mathematical analyses reveal transient accumulation of activated receptors at regions of higher curvature with increasing cell eccentricity. This distribution of activated receptors is periodic, following the Mathieu function, and it arises from local imbalance between reaction and diffusion of soluble ligands and receptors in the plane of the membrane. Numerical simulations show that transient microdomains of activated receptors amplify signals to downstream protein kinases. For growth factor receptor pathways, increasing cell eccentricity elevates the levels of activated cytoplasmic Src and nuclear MAPK1,2. These predictions were experimentally validated by changing cellular eccentricity, showing that shape is a locus of retrievable information storage in cells.

Indexed as

Cell ShapeModels, BiologicalSignal TransductionAnimalsCell MembraneChlorocebus aethiopsCOS CellsHumansRats

Identifiers

PMID24034255
PMCPMC3874130
OpenAlexW2065475665

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.