Evidence map›Paper›PMID 24033097›Full record

ArticleThe New phytologist2014

Extreme diversification of the mating type-high-mobility group (MATA-HMG) gene family in a plant-associated arbuscular mycorrhizal fungus.

Rohan Riley, Philippe Charron, Alexander Idnurm, Laurent Farinelli, Yolande Dalpé, Francis Martin, Nicolas Corradi

Open access · bronzeAbstract read
PubMed Publisher
In one paragraph

Article in The New phytologist, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
11.1field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 49 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Fungal Sex: The Mucoromycota.Microbiology spectrum · 2017
    Review
  9. Article
  10. Article
  11. Article
  12. Review
  13. Unseen sex in ancient virgin fungi.The New phytologist · 2014
    Article
  14. Expanding genomics of mycorrhizal symbiosis.Frontiers in microbiology · 2014
    Review
  15. Article
  16. Genome of an arbuscular mycorrhizal fungus provides insight into the oldest plant symbiosis.Proceedings of the National Academy of Sciences of the United States of America · 2013
    Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

7 authors at 5 institutions in 3 countries.

Rohan RileyCanadian Institute for Advanced Research, Department of Biology, University of Ottawa, Ottawa, ON, K1N 6N5, Canada.
Philippe CharronCanadian Institute for Advanced Research, Department of Biology, University of Ottawa, Ottawa, ON, K1N 6N5, Canada.
Alexander IdnurmDivision of Cell Biology and Biophysics, School of Biological Sciences, University of Missouri-Kansas City, Kansas City, MO, USA.
Laurent FarinelliFASTERIS S.A., Ch. du Pont-du-Centenaire 109, PO Box 28, CH-1228, Plan-les-Ouates, Switzerland.
Yolande DalpéAgriculture and Agri-Food Canada, 960 Carling Ave., Ottawa, ON, K1A 0C6, Canada.
Francis MartinUMR INRA-UHP 'Interaction Arbres/Micro-Organismes', Centre INRA de Nancy, Champenoux, France.
Nicolas CorradiCanadian Institute for Advanced Research, Department of Biology, University of Ottawa, Ottawa, ON, K1N 6N5, Canada.
University of Ottawa · CAAgriculture and Agri-Food Canada · CADuPont (United States) · USInteractions Arbres-Microorganismes · FRUniversity of Missouri–Kansas City · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Arbuscular mycorrhizal fungi (AMF) are important plant symbionts that have long been considered evolutionary anomalies because of their apparent long-term lack of sexuality, but recent explorations of available DNA sequence have challenged this notion by revealing the presence of homologues of fungal mating type-high-mobility group (MATA-HMG) and core meiotic genes in these organisms. To obtain more insights into the sexual potential of AMF, homologues of MATA-HMGs were sought in the transcriptome of three AMF isolates, and their functional and evolutionary trajectories were studied in genetically divergent strains of Rhizophagus irregularis using conventional and quantitative PCR procedures. Our analyses revealed the presence of at least 76 homologues of MATA-HMGs in R. irregularis isolates. None of these was found to be surrounded by genes generally found near other known fungal mating type loci, but here we report the presence of a 9-kb-long region in the AMF R. irregularis harbouring a total of four tandem-repeated MATA-HMGs; a feature that highlights a potentially elevated intragenomic diversity in this AMF species. The present study provides intriguing insights into the genome evolution of R. irregularis, and represents a stepping stone for understanding the potential of these fungi to undergo cryptic sex.

Indexed as

DNA, FungalEvolution, MolecularGenes, Mating Type, FungalFungal ProteinsGenome, FungalGlomeromycotaHigh Mobility Group ProteinsMultigene FamilyMycorrhizaePhylogenyReproductionTandem Repeat SequencesTranscriptomeDNA, FungalFungal ProteinsHigh Mobility Group Proteinsancient asexualsarbuscular mycorrhizal fungi (AMF)heterokaryosishigh-mobility group proteinsmatingparalogyrecombination

Identifiers

PMID24033097
OpenAlexW2141778636

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.