Evidence map›Paper›PMID 24032348›Full record

ArticleAmerican journal of respiratory and critical care medicine2013

Native American ancestry affects the risk for gene methylation in the lungs of Hispanic smokers from New Mexico.

Shuguang Leng, Yushi Liu, Cynthia L Thomas, W James Gauderman, Maria A Picchi, Shannon E Bruse, Xiequn Zhang, Kristina G Flores, David Van Den Berg, Christine A Stidley and 2 more

Open access · greenAbstract read
In one paragraph

Article in American journal of respiratory and critical care medicine, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed, 1 pooled it
1.3field-weighted citation impact, top 20% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed, 1 synthesis or guideline pooled it, 26 citations in OpenAlex.

  1. Pooled it
  2. Article
  3. Article
  4. Article
  5. Article
  6. Observational
  7. Article
  8. Article
  9. Gene Promoter Hypermethylation Detected in Sputum Predicts FEVAmerican journal of respiratory and critical care medicine · 2018
    Article
  10. Review
  11. Article
  12. Article
  13. Article
  14. Article
  15. Review
  16. Article
  17. Epigenetic Repression of CCDC37 and MAP1B Links Chronic Obstructive Pulmonary Disease to Lung Cancer.Journal of thoracic oncology : official publication of the International Association for the Study of Lung Cancer · 2015
    Article
  18. Article
  19. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

12 authors at 3 institutions in 1 country.

Shuguang Leng1 Lung Cancer Program, Lovelace Respiratory Research Institute, Albuquerque, New Mexico.
Yushi Liu
Cynthia L Thomas
W James Gauderman
Maria A Picchi
Shannon E Bruse
Xiequn Zhang
Kristina G Flores
David Van Den Berg
Christine A Stidley
Frank D Gilliland
Steven A Belinsky
Lovelace Respiratory Research Institute · USUniversity of Southern California · USUniversity of New Mexico · US

Funding

Factors for Epigenetic Silencing of Lung Cancer GenesR01CA097356 · NCI · LOVELACE BIOMEDICAL & ENVIRONMENTAL RESEARCH INSTITUTE · PI BELINSKY, STEVEN A · 2004 to 2014
$6.3M
NCI NIH HHS R01 CA097356
6 · The paper itself

Abstract

rationaleGene promoter methylation detected in sputum predicts lung cancer risk in smokers. Compared with non-Hispanic whites (NHW), Hispanics have a lower age-standardized incidence for lung cancer.

objectivesThis study compared the methylation prevalence in sputum of NHWs with Hispanics using the Lovelace Smokers cohort (n = 1998) and evaluated the effect of Native American ancestry (NAA) and diet on biomarkers for lung cancer risk.

methodsGenetic ancestry was estimated using 48 ancestry markers. Diet was assessed by the Harvard University Dietary Assessment questionnaire. Methylation of 12 genes was measured in sputum using methylation-specific polymerase chain reaction. The association between NAA and risk for methylation was assessed using generalized estimating equations. The ethnic difference in the association between pack-years and risk for lung cancer was assessed in the New Mexico lung cancer study. MEASUREMENTS AND MAIN

resultsOverall Hispanics had a significantly increased risk for methylation across the 12 genes analyzed (odds ratio, 1.18; P = 0.007). However, the risk was reduced by 32% (P = 0.032) in Hispanics with high versus low NAA. In the New Mexico lung cancer study, Hispanic non-small cell lung cancer cases have significantly lower pack-years than NHW counterparts (P = 0.007). Furthermore, compared with NHW smokers, Hispanic smokers had a more rapidly increasing risk for lung cancer as a function of pack-years (P = 0.058).

conclusionsNAA may be an important risk modifier for methylation in Hispanic smokers. Smoking intensity may have a greater impact on risk for lung cancer in Hispanics compared with NHWs.

Indexed as

DietAgedAmerican Indian or Alaska NativeCarcinoma, Non-Small-Cell LungCohort StudiesDNA MethylationFemaleFolic AcidHispanic or LatinoHumansLongitudinal StudiesLung NeoplasmsMaleMiddle AgedMultivariate AnalysisNew MexicoFolic Acid

Identifiers

PMID24032348
PMCPMC3863742
OpenAlexW2024970176

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.