Evidence map›Paper›PMID 24029427›Full record

ArticleJournal of the American Society of Nephrology : JASN2013

Chromosome 2q31.1 associates with ESRD in women with type 1 diabetes.

Niina Sandholm, Amy Jayne McKnight, Rany M Salem, Eoin P Brennan, Carol Forsblom, Valma Harjutsalo, Ville-Petteri Mäkinen, Gareth J McKay, Denise M Sadlier, Winfred W Williams and 15 more

Open access · bronzeAbstract read
In one paragraph

Article in Journal of the American Society of Nephrology : JASN, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 40 papers, 5 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
40citing papers in PubMed, 5 pooled it
5.6field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

40 citing papers in PubMed, 5 syntheses or guidelines pooled it, 74 citations in OpenAlex.

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  8. Integrated multiomic analyses: An approach to improve understanding of diabetic kidney disease.Diabetic medicine : a journal of the British Diabetic Association · 2025
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4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

25 authors at 12 institutions in 9 countries.

Niina SandholmFolkhälsan Institute of Genetics, Folkhälsan Research Center, Helsinki, Finland;
Amy Jayne McKnight
Rany M Salem
Eoin P Brennan
Carol Forsblom
Valma Harjutsalo
Ville-Petteri Mäkinen
Gareth J McKay
Denise M Sadlier
Winfred W Williams
Finian Martin
Nicolae Mircea Panduru
Lise Tarnow
Jaakko Tuomilehto
Karl Tryggvason
Gianpaolo Zerbini
Mary E Comeau
Carl D Langefeld
FIND Consortium
Catherine Godson
Joel N Hirschhorn
Alexander P Maxwell
Jose C Florez
Per-Henrik Groop
FinnDiane Study Group and the GENIE Consortium
Folkhälsans Forskningscentrum · FIMater Misericordiae University Hospital · IEHarvard University · USNorth Carolina Division of Public Health · USQueen's University Belfast · GBBaker Heart and Diabetes Institute · AUBroad Institute · USCarol Davila University of Medicine and Pharmacy · ROKarolinska Institutet · SESteno Diabetes Center · DKUniversität für Weiterbildung Krems · ATUniversity of Ulster · GB

Funding

ZOVIRAX CREAM TO TREAT HERPES LABIALIS IN ADOLESCENTSM01RR000827 · NCRR · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI CHANG, R JEFFREY · 1985 to 2010
$74.3M
ZONA-FREE HAMSTER OVA ASSAY AS AN INDICATOR OF MALE FERTILITYM01RR000425 · NCRR · LUNDQUIST INSTITUTE FOR BIOMEDICAL INNOVATION AT HARBOR-UCLA MEDICAL CENTER · PI ANDERSON, GAIL V · 1985 to 2011
$74.2M
WORKER PROTECTION AGAINST AIRBORNE INFLUENZA - A PILOT STUDYM01RR007122 · NCRR · WAKE FOREST UNIVERSITY HEALTH SCIENCES · PI HUNDLEY, WILLIAM GREGORY · 1992 to 2010
$35.2M
ZUNI KIDNEY PROJECT STUDY I--POPULATION BASED SURVEY OF RENAL DISEASEM01RR000997 · NCRR · UNIVERSITY OF NEW MEXICO · PI ROLDAN, CARLOS A · 1985 to 2010
$30.0M
ZOLEDRONATE VS AREDIA IN MULTIPLE MYELOMA/BREAST CANCER W /BONE DISORDERSM01RR001346 · NCRR · UNIVERSITY OF TEXAS HLTH SCIENCE CENTER · PI FERRER, ROBERT L · 1985 to 2008
$23.1M
Zosuquidar trihydrochloride for acute myeloid leukemia &refractory anemiaM01RR000080 · NCRR · UNIVERSITY HOSPITALS OF CLEVELAND · PI DAVIS, PAMELA B · 1985 to 2007
$22.2M
LINKAGE CONSORTIUM FOR END-STAGE RENAL DISEASEU01DK057292 · NIDDK · CASE WESTERN RESERVE UNIVERSITY · PI IYENGAR, SUDHA K · 1999 to 2009
$13.1M
RENAL FAILURE GENES IN THE SOUTHEASTERN USU01DK057298 · NIDDK · WAKE FOREST UNIVERSITY HEALTH SCIENCES · PI FREEDMAN, BARRY IRA · 1999 to 2006
$3.2M
MALD FIND RenewalU01DK057304 · NIDDK · JOHNS HOPKINS UNIVERSITY · PI PAREKH, RULAN S · 1999 to 2007
$2.5M
The Genetic Basis of Diabetic Retinopathy in Mexican Am*U01DK057295 · NIDDK · UNIVERSITY OF TEXAS HLTH SCIENCE CENTER · PI ABBOUD, HANNA E · 1999 to 2006
$2.3M
Genome-Wide Association Studies of Diabetic NephropathyR01DK081923 · NIDDK · BROAD INSTITUTE, INC. · PI HIRSCHHORN, JOEL N · 2009 to 2012
$2.3M
IDENTIFICATION OF DIABETIC NEPHROPATHY RISK GENESU01DK057249 · NIDDK · LA BIOMED RES INST/ HARBOR UCLA MED CTR · PI ADLER, SHARON G · 1999 to 2004
$2.3M
Intramural NIH HHSMedical Research Council MR/K003364/1NCI NIH HHS N01 CO012400NCI NIH HHS N01-CO-12400NCRR NIH HHS M01 RR000080NCRR NIH HHS M01-RR-000080NCRR NIH HHS M01 RR000425NCRR NIH HHS M01 RR000827NCRR NIH HHS M01 RR000997NCRR NIH HHS M01 RR001346NCRR NIH HHS M01-RR-00425NCRR NIH HHS M01 RR007122NCRR NIH HHS M01-RR-00827-29NCRR NIH HHS M01-RR-00997NCRR NIH HHS M01-RR-01346NCRR NIH HHS M01-RR-07122NIDDK NIH HHS DK57292-05NIDDK NIH HHS R01 DK081923NIDDK NIH HHS U01 DK057249NIDDK NIH HHS U01DK057249NIDDK NIH HHS U01 DK057292NIDDK NIH HHS U01 DK057295NIDDK NIH HHS U01 DK057298NIDDK NIH HHS U01DK057298NIDDK NIH HHS U01 DK057300NIDDK NIH HHS U01DK057300NIDDK NIH HHS U01 DK057303NIDDK NIH HHS U01DK057303NIDDK NIH HHS U01 DK057304NIDDK NIH HHS U01 DK057329NIDDK NIH HHS U01 DK070657NIDDK NIH HHS U01DK070657NIDDK NIH HHS U01DK57292NIDDK NIH HHS U01DK57295NIDDK NIH HHS U01DK57304NIDDK NIH HHS U01DK57329Wellcome TrustWellcome Trust WT090355/A/09/ZWellcome Trust WT090355/B/09/Z
6 · The paper itself

Abstract

Sex and genetic variation influence the risk of developing diabetic nephropathy and ESRD in patients with type 1 diabetes. We performed a genome-wide association study in a cohort of 3652 patients from the Finnish Diabetic Nephropathy (FinnDiane) Study with type 1 diabetes to determine whether sex-specific genetic risk factors for ESRD exist. A common variant, rs4972593 on chromosome 2q31.1, was associated with ESRD in women (P<5×10(-8)) but not in men (P=0.77). This association was replicated in the meta-analysis of three independent type 1 diabetes cohorts (P=0.02) and remained significant for women (P<5×10(-8); odds ratio, 1.81 [95% confidence interval, 1.47 to 2.24]) upon combined meta-analysis of the discovery and replication cohorts. rs4972593 is located between the genes that code for the Sp3 transcription factor, which interacts directly with estrogen receptor α and regulates the expression of genes linked to glomerular function and the pathogenesis of nephropathy, and the CDCA7 transcription factor, which regulates cell proliferation. Further examination revealed potential transcription factor-binding sites within rs4972593 and predicted eight estrogen-responsive elements within 5 kb of this locus. Moreover, we found sex-specific differences in the glomerular expression levels of SP3 (P=0.004). Overall, these results suggest that rs4972593 is a sex-specific genetic variant associated with ESRD in patients with type 1 diabetes and may underlie the sex-specific protection against ESRD.

Indexed as

AdultCase-Control StudiesChromosomes, Human, Pair 2Diabetes Mellitus, Type 1Diabetic NephropathiesFemaleGenome-Wide Association StudyHumansKidney Failure, ChronicMaleMiddle AgedNuclear ProteinsSex CharacteristicsSp3 Transcription FactorCDCA7 protein, humanNuclear ProteinsSP3 protein, humanSp3 Transcription Factor

Identifiers

PMID24029427
PMCPMC3785274
OpenAlexW2151685786

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.