Evidence map›Paper›PMID 24027018›Full record

ArticleCellular oncology (Dordrecht, Netherlands)2013

Regulation of MLH1 mRNA and protein expression by promoter methylation in primary colorectal cancer: a descriptive and prognostic cancer marker study.

Lars Henrik Jensen, Anders Aamann Rasmussen, Lene Byriel, Hidekazu Kuramochi, Dorthe Gylling Crüger, Jan Lindebjerg, Peter V Danenberg, Anders Jakobsen, Kathleen Danenberg

Abstract read
In one paragraph

Article in Cellular oncology (Dordrecht, Netherlands), 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed, 2 pooled it
2.1field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 2 syntheses or guidelines pooled it, 22 citations in OpenAlex.

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  11. Epigenetic alterations in a gastric leiomyoma.Case reports in gastrointestinal medicine · 2014
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 3 institutions in 2 countries.

Lars Henrik JensenDanish Colorectal Cancer Group South, University of Southern Denmark and Vejle Hospital, Vejle, Denmark, lars.henrik.jensen@rsyd.dk.
Anders Aamann Rasmussen
Lene Byriel
Hidekazu Kuramochi
Dorthe Gylling Crüger
Jan Lindebjerg
Peter V Danenberg
Anders Jakobsen
Kathleen Danenberg
University of Southern Denmark · DKVejle Sygehus · DKUniversity of Southern California · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundIn colorectal cancer MLH1 deficiency causes microsatellite instability, which is relevant for the patient's prognosis and treatment, and its putative heredity. Dysfunction of MLH1 is caused by sporadic gene promoter hypermethylation or by hereditary mutations as seen in Lynch Syndrome. The aim of this study was to determine in detail how DNA methylation regulates MLH1 expression and impacts clinical management.

methodsColorectal cancer samples were collected from 210 patients. The laboratory methods used to study these samples included methylation specific multiplex ligation-dependent probe amplification (MS-MLPA), real-time quantitative PCR (qPCR), and immunohistochemistry (IHC).

resultsWe found that the MLH1 mRNA and protein expression levels were highly related. MS-MLPA was successful in tumors from 195 patients. In these tumors, hypermethylation was observed in promoter regions A (n = 57), B (n = 30), C (n = 28), and D (n = 47), and in intron 1 (n = 25). The promoter region C and intron 1 methylation levels were found to be excellently suited for discriminating between low and high gene expression levels, whereas those of promoter regions A, B and D were less specific. Hypermethylation in any region (n = 77) served as an independent prognostic factor (hazard ratio 0.56, 95 % confidence interval 0.36-0.89, p = 0.01).

conclusionsMLH1 inactivation through hypermethylation was found to be related to improved survival. Hypermethylation in promoter region C and intron 1 served as the most specific markers for this inactivation.

Indexed as

Adaptor Proteins, Signal TransducingAgedColorectal NeoplasmsDNA MethylationFemaleHumansMaleMiddle AgedMutL Protein Homolog 1Nuclear ProteinsPromoter Regions, GeneticRNA, MessengerAdaptor Proteins, Signal TransducingMLH1 protein, humanMutL Protein Homolog 1Nuclear ProteinsRNA, Messenger

Identifiers

PMID24027018
PMCPMC13012202
OpenAlexW2044359460

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.