Evidence map›Paper›PMID 24026177›Full record

ArticleGenome research2013

Derived variants at six genes explain nearly half of size reduction in dog breeds.

Maud Rimbault, Holly C Beale, Jeffrey J Schoenebeck, Barbara C Hoopes, Jeremy J Allen, Paul Kilroy-Glynn, Robert K Wayne, Nathan B Sutter, Elaine A Ostrander

Open access · bronzeAbstract read
In one paragraph

Article in Genome research, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 102 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
102citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

102 citing papers in PubMed, 1 synthesis or guideline pooled it, 166 citations in OpenAlex.

  1. Pooled it
  2. Article
  3. iScience · 2026
    Article
  4. Article
  5. Dachshund spinal health by coat and size type.Journal of veterinary internal medicine · 2026
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  6. Article
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  8. Article
  9. Blood biomarkers and breed genetics of aging in pet dogs.bioRxiv : the preprint server for biology · 2026
    Article
  10. Article
  11. Article
  12. Genetic testing predicts appearance but not behavior in dogs.Proceedings of the National Academy of Sciences of the United States of America · 2025
    Article
  13. Article
  14. Article
  15. Genotypic and phenotypic consequences of domestication in dogs.bioRxiv : the preprint server for biology · 2025
    Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. Article

42 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 5 institutions in 2 countries.

Maud RimbaultCancer Genetics Branch, National Human Genome Research Institute, National Institutes of Health, Bethesda, Maryland 20892, USA;
Holly C Beale
Jeffrey J Schoenebeck
Barbara C Hoopes
Jeremy J Allen
Paul Kilroy-Glynn
Robert K Wayne
Nathan B Sutter
Elaine A Ostrander
National Institutes of Health · USCornell University · USColgate University · USDublin City University · IEUniversity of California, Los Angeles · US

Funding

Comparative Mammalian GenomicsZIAHG200377 · NHGRI · NATIONAL HUMAN GENOME RESEARCH INSTITUTE · PI OSTRANDER, ELAINE · 2012 to 2025
$24.8M
Identifying Genome Wide SINE Retrotransposons Contributing to Dog Size VariationR21HG006051 · NHGRI · CORNELL UNIVERSITY · PI SUTTER, NATHAN B · 2011 to 2012
$462k
Biotechnology and Biological Sciences Research Council BBS/E/D/20211553Intramural NIH HHSNHGRI NIH HHS 5R21HG006051-02NHGRI NIH HHS R21 HG006051
6 · The paper itself

Abstract

Selective breeding of dogs by humans has generated extraordinary diversity in body size. A number of multibreed analyses have been undertaken to identify the genetic basis of this diversity. We analyzed four loci discovered in a previous genome-wide association study that used 60,968 SNPs to identify size-associated genomic intervals, which were too large to assign causative roles to genes. First, we performed fine-mapping to define critical intervals that included the candidate genes GHR, HMGA2, SMAD2, and STC2, identifying five highly associated markers at the four loci. We hypothesize that three of the variants are likely to be causative. We then genotyped each marker, together with previously reported size-associated variants in the IGF1 and IGF1R genes, on a panel of 500 domestic dogs from 93 breeds, and identified the ancestral allele by genotyping the same markers on 30 wild canids. We observed that the derived alleles at all markers correlated with reduced body size, and smaller dogs are more likely to carry derived alleles at multiple markers. However, breeds are not generally fixed at all markers; multiple combinations of genotypes are found within most breeds. Finally, we show that 46%-52.5% of the variance in body size of dog breeds can be explained by seven markers in proximity to exceptional candidate genes. Among breeds with standard weights <41 kg (90 lb), the genotypes accounted for 64.3% of variance in weight. This work advances our understanding of mammalian growth by describing genetic contributions to canine size determination in non-giant dog breeds.

Indexed as

BreedingGenetic VariationAllelesAnimalsBody SizeDogsGenetic MarkersGenomeGenome-Wide Association StudyGenotypeGlycoproteinsHMGA2 ProteinInsulin-Like Growth Factor IMolecular Sequence DataPolymorphism, Single NucleotideQuantitative Trait LociGenetic MarkersGlycoproteinsHMGA2 ProteinInsulin-Like Growth Factor IReceptor, IGF Type 1Receptors, SomatotropinSmad2 Protein

Identifiers

PMID24026177
PMCPMC3847769
OpenAlexW2140790846

What OpenQuestion holds

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LicenceCC BY-NC
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.