Evidence map›Paper›PMID 24024739›Full record

ArticleAnnals of the American Thoracic Society2013

Large ABCA3 and SFTPC deletions resulting in lung disease.

Lindsay B Henderson, Kristin Melton, Susan Wert, Jonathan Couriel, Andrew Bush, Michael Ashworth, Lawrence M Nogee

Open access · greenAbstract readCase Reports
In one paragraph

Article in Annals of the American Thoracic Society, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed, 1 pooled it
2.1field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 1 synthesis or guideline pooled it, 32 citations in OpenAlex.

  1. Systematic review of drug effects in humans and models with surfactant-processing disease.European respiratory review : an official journal of the European Respiratory Society · 2018
    Pooled it
  2. Article
  3. Biomedicines · 2024
    Review
  4. Review
  5. Review
  6. Review
  7. Article
  8. Review
  9. Article
  10. Article
  11. Review
  12. Genetic causes of surfactant protein abnormalities.Current opinion in pediatrics · 2019
    Review
  13. Respiratory failure in a term infant with cis and trans mutations in ABCA3.Journal of perinatology : official journal of the California Perinatal Association · 2015
    Article
  14. Genotype-phenotype correlations for infants and children with ABCA3 deficiency.American journal of respiratory and critical care medicine · 2014
    Article
  15. Interstitial lung disease in children.Current opinion in pediatrics · 2014
    Review
  16. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 6 institutions in 2 countries.

Lindsay B Henderson1 McKusick-Nathans Institute of Genetic Medicine, Johns Hopkins University, Baltimore, Maryland.
Kristin Melton
Susan Wert
Jonathan Couriel
Andrew Bush
Michael Ashworth
Lawrence M Nogee
Johns Hopkins University · USCincinnati Children's Hospital Medical Center · USRoyal Brompton Hospital · GBUniversity College London · GBUniversity of Cincinnati · USUniversity of Liverpool · GB

Funding

Surfactant protein gene mutations in lung diseaseR01HL054703 · NHLBI · JOHNS HOPKINS UNIVERSITY · PI NOGEE, LAWRENCE M · 2001 to 2011
$2.4M
SP-B GENE MUTATIONS AND NEONATAL LUNG DISEASER29HL054703 · NHLBI · JOHNS HOPKINS UNIVERSITY · PI NOGEE, LAWRENCE M · 1995 to 1999
–
NHLBI NIH HHS HL-54703NHLBI NIH HHS R01 HL054703NHLBI NIH HHS R29 HL054703
6 · The paper itself

Abstract

rationaleMutations in genes encoding proteins important in the function and metabolism of pulmonary surfactant are recognized causes of lung disease. Clinical genetic testing is available for these disorders, but children with phenotypes consistent with surfactant dysfunction and no identifiable mutations in the known causative genes have been reported.

objectivesTo identify the mechanism(s) for lung disease in two children with the phenotype of surfactant dysfunction who had negative testing in clinical laboratories for gene mutations causing surfactant dysfunction.

methodsAmplicons spanning multiple exons of candidate genes were generated by polymerase chain reaction and sequenced. MEASUREMENTS AND MAIN

resultsA 4,335-base deletion that included all of exon 12 of the gene encoding member A3 of the adenosine triphosphate-binding cassette transporter was identified in a full-term infant with respiratory failure. A 333-base deletion involving part of exon 4 and the adjacent intron of the gene encoding surfactant protein C was identified in a child with interstitial lung disease.

conclusionsLarge deletions are a cause of surfactant dysfunction disorders and may need to be sought for specifically in children whose phenotypes suggest these syndromes but in whom clinical genetic testing is unrevealing.

Indexed as

Gene DeletionATP-Binding Cassette TransportersHumansInfant, NewbornLungLung Diseases, InterstitialMalePulmonary Surfactant-Associated Protein CPulmonary SurfactantsRadiographyRespiratory Distress Syndrome, NewbornABCA3 protein, humanATP-Binding Cassette TransportersPulmonary Surfactant-Associated Protein CPulmonary SurfactantsSFTPC protein, human

Identifiers

PMID24024739
PMCPMC3960967
OpenAlexW2149423027

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.