Evidence map›Paper›PMID 24023901›Full record

ArticlePloS one2013

DEAD box protein DDX1 regulates cytoplasmic localization of KSRP.

Chu-Fang Chou, Wei-Jye Lin, Chen-Chung Lin, Christian A Luber, Roseline Godbout, Matthias Mann, Ching-Yi Chen

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
0.6field-weighted citation impact, top 31% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 15 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 3 countries.

Chu-Fang ChouDepartment of Biochemistry and Molecular Genetics, University of Alabama at Birmingham, Birmingham, Alabama, United States of America.
Wei-Jye Lin
Chen-Chung Lin
Christian A Luber
Roseline Godbout
Matthias Mann
Ching-Yi Chen
University of Alabama at Birmingham · USMax Planck Society · DEUniversity of Alberta · CA

Funding

REGULATION OF EXOSOME-MEDIATED MAMMALIAN mRNA TURNOVERR01GM068758 · NIGMS · UNIVERSITY OF ALABAMA AT BIRMINGHAM · PI CHEN, CHING-YI · 2004 to 2013
$2.5M
NIGMS NIH HHS GM68758NIGMS NIH HHS R01 GM068758
6 · The paper itself

Abstract

mRNA decay mediated by the AU-rich elements (AREs) is one of the most studied post-transcriptional mechanisms and is modulated by ARE-binding proteins (ARE-BPs). To understand the regulation of K homology splicing regulatory protein (KSRP), a decay-promoting ARE-BP, we purified KSRP protein complexes and identified an RNA helicase, DDX1. We showed that down-regulation of DDX1 expression elevated cytoplasmic levels of KSRP and facilitated ARE-mediated mRNA decay. Association of KSRP with 14-3-3 proteins, that are predominately located in the cytoplasm, increased upon reduction of DDX1. We also demonstrated that KSRP associated with DDX1 or 14-3-3, but not both. These observations indicate that subcellular localization of KSRP is regulated by competing interactions with DDX1 or 14-3-3.

Indexed as

14-3-3 ProteinsActive Transport, Cell NucleusCell NucleusCytoplasmDEAD-box RNA HelicasesHeLa CellsHumansRNA-Binding ProteinsTrans-Activators14-3-3 ProteinsDDX1 protein, humanDEAD-box RNA HelicasesKHSRP protein, humanRNA-Binding ProteinsTrans-Activators

Identifiers

PMID24023901
PMCPMC3762726
OpenAlexW2074864512

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.