Evidence map›Paper›PMID 24023844›Full record

ArticlePloS one2013

Snorkel: an epitope tagging system for measuring the surface expression of membrane proteins.

Michael Brown, Lewis J Stafford, Dale Onisk, Tony Joaquim, Alhagie Tobb, Larissa Goldman, David Fancy, James Stave, Ross Chambers

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
–field-weighted citation impact, top 85% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 13 citations in OpenAlex.

  1. Spatial Regulation of CAR Signaling Enables Logic-Gated Activity.bioRxiv : the preprint server for biology · 2026
    Article
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  4. Review
  5. Article
  6. A versatile platform for generating engineered extracellular vesicles with defined therapeutic properties.Molecular therapy : the journal of the American Society of Gene Therapy · 2021
    Article
  7. Interrogating surfaceChemical science · 2020
    Article
  8. Article
  9. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Michael BrownSDIX, Newark, Delaware, United States of America.
Lewis J Stafford
Dale Onisk
Tony Joaquim
Alhagie Tobb
Larissa Goldman
David Fancy
James Stave
Ross Chambers

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Tags are widely used to monitor a protein's expression level, interactions, protein trafficking, and localization. Membrane proteins are often tagged in their extracellular domains to allow discrimination between protein in the plasma membrane from that in internal pools. Multipass membrane proteins offer special challenges for inserting a tag since the extracellular regions are often composed of small loops and thus inserting an epitope tag risks perturbing the structure, function, or location of the membrane protein. We have developed a novel tagging system called snorkel where a transmembrane domain followed by a tag is appended to the cytoplasmic C-terminus of the membrane protein. In this way the tag is displayed extracellularly, but structurally separate from the membrane protein. We have tested the snorkel tag system on a diverse panel of membrane proteins including GPCRs and ion channels and demonstrated that it reliably allows for monitoring of the surface expression.

Indexed as

Gene Expression RegulationAmino Acid SequenceEpitopesExtracellular SpaceHEK293 CellsHumansMembrane ProteinsMolecular Sequence DataStaining and LabelingEpitopesMembrane Proteins

Identifiers

PMID24023844
PMCPMC3759426
OpenAlexW2078538655

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.