Evidence map›Paper›PMID 24023621›Full record

ArticlePloS one2013

The respiratory arsenite oxidase: structure and the role of residues surrounding the rieske cluster.

Thomas P Warelow, Muse Oke, Barbara Schoepp-Cothenet, Jan U Dahl, Nicole Bruselat, Ganesh N Sivalingam, Silke Leimkühler, Konstantinos Thalassinos, Ulrike Kappler, James H Naismith and 1 more

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 23 papers.

0numbers the graph read from it
0cells of the map it votes in
23citing papers in PubMed
4.3field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

23 citing papers in PubMed, 61 citations in OpenAlex.

  1. Article
  2. Review
  3. Review
  4. The critical role of a conserved lysine residue in periplasmic nitrate reductase catalyzed reactions.Journal of biological inorganic chemistry : JBIC : a publication of the Society of Biological Inorganic Chemistry · 2024
    Article
  5. ACS omega · 2024
    Article
  6. Review
  7. Article
  8. Article
  9. Kinetic consequences of the endogenous ligand to molybdenum in the DMSO reductase family: a case study with periplasmic nitrate reductase.Journal of biological inorganic chemistry : JBIC : a publication of the Society of Biological Inorganic Chemistry · 2021
    Article
  10. Functional mononuclear molybdenum enzymes: challenges and triumphs in molecular cloning, expression, and isolation.Journal of biological inorganic chemistry : JBIC : a publication of the Society of Biological Inorganic Chemistry · 2020
    Review
  11. Review
  12. Molybdenum-Containing Enzymes.Methods in molecular biology (Clifton, N.J.) · 2019
    Article
  13. Unraveling the inner workings of respiratory arsenate reductase.Proceedings of the National Academy of Sciences of the United States of America · 2018
    Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. Structural and mechanistic insights on nitrate reductases.Protein science : a publication of the Protein Society · 2015
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 6 institutions in 4 countries.

Thomas P WarelowInstitute of Structural and Molecular Biology, University College London, London, United Kingdom.
Muse Oke
Barbara Schoepp-Cothenet
Jan U Dahl
Nicole Bruselat
Ganesh N Sivalingam
Silke Leimkühler
Konstantinos Thalassinos
Ulrike Kappler
James H Naismith
Joanne M Santini
University College London · GBInstitute of Structural and Molecular Biology · GBUniversity of Potsdam · DEUniversity of St Andrews · GBBioénergétique et Ingénierie des Protéines · FRThe University of Queensland · AU

Funding

Biotechnology and Biological Sciences Research Council BB/F016948/1Biotechnology and Biological Sciences Research Council BBS/B/14426Biotechnology and Biological Sciences Research Council BB/S/B14450
6 · The paper itself

Abstract

The arsenite oxidase (Aio) from the facultative autotrophic Alphaproteobacterium Rhizobium sp. NT-26 is a bioenergetic enzyme involved in the oxidation of arsenite to arsenate. The enzyme from the distantly related heterotroph, Alcaligenes faecalis, which is thought to oxidise arsenite for detoxification, consists of a large α subunit (AioA) with bis-molybdopterin guanine dinucleotide at its active site and a 3Fe-4S cluster, and a small β subunit (AioB) which contains a Rieske 2Fe-2S cluster. The successful heterologous expression of the NT-26 Aio in Escherichia coli has resulted in the solution of its crystal structure. The NT-26 Aio, a heterotetramer, shares high overall similarity to the heterodimeric arsenite oxidase from A. faecalis but there are striking differences in the structure surrounding the Rieske 2Fe-2S cluster which we demonstrate explains the difference in the observed redox potentials (+225 mV vs. +130/160 mV, respectively). A combination of site-directed mutagenesis and electron paramagnetic resonance was used to explore the differences observed in the structure and redox properties of the Rieske cluster. In the NT-26 AioB the substitution of a serine (S126 in NT-26) for a threonine as in the A. faecalis AioB explains a -20 mV decrease in redox potential. The disulphide bridge in the A. faecalis AioB which is conserved in other betaproteobacterial AioB subunits and the Rieske subunit of the cytochrome bc 1 complex is absent in the NT-26 AioB subunit. The introduction of a disulphide bridge had no effect on Aio activity or protein stability but resulted in a decrease in the redox potential of the cluster. These results are in conflict with previous data on the betaproteobacterial AioB subunit and the Rieske of the bc 1 complex where removal of the disulphide bridge had no effect on the redox potential of the former but a decrease in cluster stability was observed in the latter.

Indexed as

AerobiosisAlcaligenes faecalisAlphaproteobacteriaElectron Spin Resonance SpectroscopyElectron Transport Complex IIIElectrophoresis, Polyacrylamide GelEscherichia coliModels, MolecularMolybdenumMutant ProteinsMutationOxidation-ReductionOxidoreductasesProtein MultimerizationRecombinant ProteinsStructure-Activity Relationshiparsenite oxidaseElectron Transport Complex IIIMolybdenumMutant ProteinsOxidoreductasesRecombinant ProteinsRieske iron-sulfur protein

Identifiers

PMID24023621
PMCPMC3758308
OpenAlexW2121916881

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.