Evidence map›Paper›PMID 24022586›Full record

ArticleThe Journal of biological chemistry2013

Silk gland factor-2, involved in fibroin gene transcription, consists of LIM homeodomain, LIM-interacting, and single-stranded DNA-binding proteins.

Kaoru Ohno, Jun-ichi Sawada, Shigeharu Takiya, Mai Kimoto, Akiko Matsumoto, Takuya Tsubota, Keiro Uchino, Chi-chung Hui, Hideki Sezutsu, Hiroshi Handa and 1 more

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed
2.1field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed, 60 citations in OpenAlex.

  1. Targeting the circadian negative regulatorMaterials today. Bio · 2026
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  2. Characterization ofInsects · 2026
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  8. Article
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  11. Deep Insight into the Transcriptome of the Single Silk Gland ofInternational journal of molecular sciences · 2019
    Article
  12. Article
  13. Article
  14. Review
  15. Article
  16. Article
  17. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 4 institutions in 1 country.

Kaoru OhnoFrom the National Institute for Basic Biology, 38 Nishigonaka, Myodaiji-cho, Okazaki 444-8585.
Jun-ichi Sawada
Shigeharu Takiya
Mai Kimoto
Akiko Matsumoto
Takuya Tsubota
Keiro Uchino
Chi-chung Hui
Hideki Sezutsu
Hiroshi Handa
Yoshiaki Suzuki
Institute of Agrobiological Sciences · JPNational Institute for Basic Biology · JPTokyo Institute of Technology · JPHokkaido University · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

SGF-2 binds to promoter elements governing posterior silk gland-specific expression of the fibroin gene in Bombyx mori. We purified SGF-2 and showed that SGF-2 contains at least four gene products: the silkworm orthologues of LIM homeodomain protein Awh, LIM domain-binding protein (Ldb), a sequence-specific single-stranded DNA-binding protein (Lcaf), and the silk protein P25/fibrohexamerin (fhx). Using co-expression of these factors in Sf9 cells, Awh, Ldb, and Lcaf proteins were co-purified as a ternary complex that bound to the enhancer sequence in vitro. Lcaf interacts with Ldb as well as Awh through the conserved regions to mediate transcriptional activation in yeast. Misexpression of Awh in transgenic silkworms induces ectopic expression of the fibroin gene in the middle silk glands, where Ldb and Lcaf are expressed. Taken together, this study demonstrates that SGF-2 is a multisubunit activator complex containing Awh. Moreover, our results suggest that the Ldb·Lcaf protein complex serves as a scaffold to facilitate communication between transcriptional control elements.

Indexed as

Amino Acid SequenceAnimalsBombyxDNA-Binding ProteinsFibroinsLIM-Homeodomain ProteinsMolecular Sequence DataResponse ElementsSf9 CellsSpodopteraTrans-ActivatorsTranscription, GeneticDNA-Binding ProteinsFibroinsLIM-Homeodomain ProteinsTrans-ActivatorsFibroin GeneGene transcriptionHomeoboxHomeodomainSilk gland factor-2 (SGF-2)SilkwormTissue-specific transcription factorsTranscription enhancers

Identifiers

PMID24022586
PMCPMC3814754
OpenAlexW2069013215

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.